KEGG T02936: U875

Pandoraea pnomenusa 3kgm: U875_14730

Entry

U875_14730        CDS       T02936

Name

(GenBank) hypothetical protein

K01247

DNA-3-methyladenine glycosylase II [EC:3.2.2.21]

Organism

ppk Pandoraea pnomenusa 3kgm

Pathway

ppk03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:ppk00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    U875_14730
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppk03400]
    U875_14730
Enzymes [BR:ppk01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     U875_14730
DNA repair and recombination proteins [BR:ppk03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     U875_14730

SSDB

Motif

Pfam:

HhH-GPD

Other DBs

NCBI-ProteinID:

AHB06452

Position

complement(3187584..3188498)

AA seq 304 aa
MPAKTPAKVSARESVKAPTKTGANTPRKVASKVASKSSRTAPASSGASGAAAGAATARRV
IAKRDGETRIVTPEIERIEHDVVEEAVTGVVPLPVAPGATRPDFWDQACADLMRRDRILK
KLIPQFGPAHLTGRGEPFVTLARSIVGQQISVKAAQSVWDRVVAVCPKLTPAQFMKAGHD
ALAGCGLSRRKAEYILDLATHFKSGALHVDAWASMEDEAVIAELTGIRGIGRWTAEMFLM
FNLMRPDVLPLDDVGLINAISVNYFSGEPVTRSEAREVAANWEPWRSVATWYMWRSLEPV
PVEY

NT seq 915 nt +upstreamnt +downstreamnt
gtgccggccaagacacctgcgaaggtgtcggccagggagtccgtcaaggcgccgacgaag
acgggtgcgaatacacctcggaaggtcgcatcgaaagtggcgtcgaagtcgtcccgcacg
gcgcctgcgtcatccggggcctcgggtgcggcggccggcgcggctaccgcgcgccgagtc
atcgcgaagcgcgacggtgaaacgcgcatcgtcacgccggagatcgaacgcatcgagcac
gatgtcgtcgaggaggcggtgacgggcgtggtgccgctgccggtcgcgccgggcgcaacg
cgccccgacttctgggatcaggcgtgcgccgatctgatgcggcgcgaccgcattctcaag
aaattgattccgcagtttggccctgcgcatctgaccgggcgcggcgagccgttcgtcacg
ctggcgcgctccattgtcggtcagcagatttccgtgaaggccgcacagtccgtgtgggat
cgcgtggtggcggtctgtccgaagctcaccccggcgcagttcatgaaggccggtcatgac
gcgcttgccgggtgcgggctgtcgcgccgcaaggccgaatacatcctcgacctggccacg
catttcaaatcgggcgcgctgcacgtcgacgcctgggcgagcatggaagacgaggccgtt
atcgccgaattgaccggcattcgcggcatcggccgctggacggcggagatgtttctgatg
ttcaacctcatgcgtcccgatgtgcttccgctcgacgacgtggggctgatcaatgccatc
agcgtcaactatttcagcggcgaacccgtcacgcgcagcgaagcgcgtgaagtggccgcc
aactgggagccgtggcgctccgtcgccacgtggtacatgtggcgaagtctcgaaccggtg
ccggtcgaatactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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