KEGG   Paenibacillus polymyxa SC2: PPSC2_00500
Entry
PPSC2_00500       CDS       T01335                                 
Symbol
yaaJ
Name
(GenBank) adenosine deaminase
  KO
K11991  tRNA(adenine34) deaminase [EC:3.5.4.33]
Organism
ppm  Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:ppm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppm03016]
    PPSC2_00500 (yaaJ)
Enzymes [BR:ppm01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.33  tRNA(adenine34) deaminase
     PPSC2_00500 (yaaJ)
Transfer RNA biogenesis [BR:ppm03016]
 Prokaryotic type
  tRNA modification factors
   Deaminases
    PPSC2_00500 (yaaJ)
SSDB
Motif
Pfam: MafB19-deam dCMP_cyt_deam_1 Bd3614-deam SNAD4 APOBEC3 APOBEC2 NAD2 APOBEC_N NAD1 Inv-AAD
Other DBs
NCBI-ProteinID: ADO54086
UniProt: E3EEW3
Position
complement(128854..129351)
AA seq 165 aa
MTIMDHAYWMREAIQEAYKAEALGEVPIGAVIVKDNEIIGRGYNLRETDTDPTAHAEMVA
IRQASEHLGAWRLLDCRLYVTLEPCPMCAGAIVQSRVPHLIYGTTDPKAGCAGTLMNLLQ
EPRFNHCTEVTSGVLQEECASMLTNFFRQLRQKRAAAKLSPPSSS
NT seq 498 nt   +upstreamnt  +downstreamnt
gtgaccattatggatcacgcctattggatgagagaagccattcaggaagcgtacaaggca
gaagcgttgggtgaagtccccatcggagctgtcattgtaaaagataatgaaatcatcggt
cgcggctacaatttgcgcgagaccgacaccgacccaactgcacacgcagagatggttgcc
atccggcaggccagtgagcatttgggagcttggcgcctgctggattgcaggctgtatgtc
actttggagccgtgtccgatgtgcgctggagccattgtgcaatcacgcgtcccccatctc
atatacggcaccacagatcccaaggcgggctgcgcaggcacgctaatgaatttattgcag
gagcctcggttcaatcattgtacagaagtaaccagtggtgtacttcaggaggaatgtgcc
tccatgctaacaaacttttttcggcagctccggcaaaaaagagcggctgccaaattgtct
cctccttcatcatcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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