KEGG   Paludibacter propionicigenes: Palpr_0297
Entry
Palpr_0297        CDS       T01362                                 
Name
(GenBank) RNAse Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
ppn  Paludibacter propionicigenes
Brite
KEGG Orthology (KO) [BR:ppn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppn03016]
    Palpr_0297
Enzymes [BR:ppn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     Palpr_0297
Transfer RNA biogenesis [BR:ppn03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Palpr_0297
 Prokaryotic type
    Palpr_0297
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4
Other DBs
NCBI-ProteinID: ADQ78459
UniProt: E4T178
Position
complement(359881..360795)
AA seq 304 aa
MQKATVTILGCGSAMPTRKNFPSSQLLEIRDKQYMIDCGEGTQIRMCQTGVKTNRLGHIF
ISHLHGDHCFGLIGLISTFGMLNRTAELHIHAQPDLEKIMQPQLQYFCADLSFNVVFHSI
NPRKHEMIFEDRSIRVFSIPLKHRVPCCGFLFEEKARDRHIIREMIDFYKIPTWRIPKIK
QGEDFETEEGEIIPNEQLTRESTPPKRFAYCSDTAYSEKIIPIISNVDCLYHEATFMEDE
HVRSKQTEHSTARQAGTIALKANVKKLIIGHYSARYNNQTELLNEAKSVFENTVLGEDMT
IYEI
NT seq 915 nt   +upstreamnt  +downstreamnt
atgcaaaaagcaactgtcaccattttgggttgtggatcggccatgccaacacgcaaaaac
tttccgagctcgcagttattggaaatcagggataagcagtacatgattgattgcggagaa
ggaacccagatacgaatgtgccaaacgggtgtcaaaaccaatcgtctgggtcatattttt
atttcgcacctccacggcgaccattgctttggtcttataggacttatctcgacctttggc
atgctcaatcgtacggcagagcttcacatacacgctcaacccgacttagagaaaataatg
caaccgcaacttcagtacttttgtgccgatctttctttcaatgttgtatttcattcgatc
aatcctcgaaaacatgaaatgatatttgaagaccgctctatacgggtcttttccattcca
ctcaaacatcgggtaccttgctgcggttttctgttcgaagaaaaagcgcgcgacaggcat
atcattcgcgaaatgattgacttctacaagatccctacctggcgcatccctaaaataaaa
cagggcgaagattttgaaaccgaagaaggcgaaataattccgaacgaacagctaacccgc
gagagcactcctccaaagcgatttgcttattgctccgacacggcatattccgaaaaaatt
atccctataatcagtaacgtagactgcctctatcacgaagctacatttatggaagatgag
catgtccggtctaaacaaaccgaacattctactgctcgacaagcaggcactattgcttta
aaggccaacgtcaagaaactcatcatcgggcattattccgctcgttacaacaatcagaca
gaattactcaacgaggccaaatccgtttttgaaaacaccgttctgggtgaagatatgact
atttacgaaatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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