KEGG   Pandoraea pnomenusa DSM 16536: LV28_08880
Entry
LV28_08880        CDS       T03411                                 
Name
(GenBank) SAM-dependent methyltransferase
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppnm03009]
    LV28_08880
Enzymes [BR:ppnm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     LV28_08880
Ribosome biogenesis [BR:ppnm03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LV28_08880
SSDB
Motif
Pfam: Methyltr_RsmB-F Methyltr_RsmF_N Methyltransf_31 Ubie_methyltran Methyltransf_25 MTS Methyltransf_15 GCD14 NSUN5_fdxn-like DUF3701
Other DBs
NCBI-ProteinID: AIU26640
Position
1190460..1191737
AA seq 425 aa
MRGEHLSPALFERTQELLGTVLTFTGPADTLVSTYFRAHDRLGHRERGVLAETVFAILRR
KLEFGQHAESGSGPLERRLALLGLAFTRGIASVKLVASAEEVDWLERVGQIDPATLKPRV
RTNLPEWLYERLAARFDAAELENLAAALNQPAPLDCRVNVVKASRDDVLATLREDGFSAE
PTPYAPNGIRLAGKPALQKHPLFVSGAIEVQDEGSQLLCQLVAPRRGEMIVDFCAGAGGK
TLAIGAQMRSTGRLYAFDVSEKRLAKLKPRLARSGLSNVYPVMIDSENDSKIKRLAGKID
RVLVDAPCSGLGTLRRNPDLKWRQTPQSVDELTQKQASILASAARLVKPGGRLVYATCSL
LNEENAAIAEAFAAAHPDFVLLPANTLLASQKIGLDTGKYLELLPNRHATDGFFAAVFER
RAAQA
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgcgcggcgaacacctgtcgcccgcgcttttcgagcgcacgcaggaattgctcggcacc
gtgctgacgttcaccggtccggccgatacgctcgtgagcacctacttccgcgctcacgac
cgcctggggcaccgcgagcgcggcgtgctggccgaaacggtattcgccatcctgcgtcgc
aagctcgaattcgggcagcacgcagagagcggttccggcccgctggagcgccgtctcgcg
ctgcttggactggcgttcacgcgcggtatcgcgtcggtcaagctcgtggcgtccgcggag
gaagtcgactggctcgagcgcgtaggacagatcgatccggcgacgctcaagccgagagtg
cgtactaacttgccggagtggctttacgaacggctggccgcgcgtttcgacgccgccgag
ctcgaaaacctggccgccgcgctcaatcaaccggcgccgctcgactgccgcgtgaacgtc
gtcaaggccagccgcgacgatgtgctcgcgacgcttcgcgaagacgggttttcggccgag
cccacgccttacgcgcccaacggcattcgcctggccggcaagccggcgctgcagaagcac
ccgctgttcgtgtccggcgcgatcgaggtgcaggacgagggtagccagttgctgtgccag
ctggtggcgccgcgccgcggtgagatgattgtcgacttctgcgccggtgccgggggcaag
acgctcgcgatcggcgcgcagatgcgctcgacggggcggctctatgcgttcgacgtctcc
gagaagcgtctcgccaagctcaagccgcgtctggcgcgcagcggtttgtcgaacgtctat
cctgtgatgatcgacagcgagaacgacagcaagatcaaacgtctggcgggcaagatcgac
cgggtgctggtcgacgcgccgtgcagcgggctgggcacgctgcgccgcaatccggacctg
aagtggcggcagacaccgcagtcggtcgacgagctcacgcagaaacaggcgtcgatcctc
gcgagtgccgcgcgcctggtcaagccgggcggtcgtctcgtgtatgccacatgcagtctg
ctcaacgaagagaacgcggctatcgccgaagcgttcgcggccgcgcatcccgacttcgtg
ctgctgccggcgaacacattgctcgcatcgcagaagatcgggctcgataccggcaagtac
ctcgagctgctgccgaaccgccacgccaccgacggtttctttgccgcggtgttcgagcgc
cgggcggcccaggcttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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