KEGG   Pandoraea pnomenusa DSM 16536: LV28_23945
Entry
LV28_23945        CDS       T03411                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppnm03016]
    LV28_23945
Enzymes [BR:ppnm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     LV28_23945
Transfer RNA biogenesis [BR:ppnm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LV28_23945
 Prokaryotic type
    LV28_23945
SSDB
Motif
Pfam: PseudoU_synth_1 SUKH-3
Other DBs
NCBI-ProteinID: AIU29227
UniProt: A0A378YZ55
Position
complement(3341320..3342120)
AA seq 266 aa
MRIALGIHYDGTAFSGWQSQPHGNTVQQALEAALREFGGVALPTTVAGRTDTGVHGIGQV
VHFDTELDRAMFSWVRGVNAFLPKTVAVQWAQAMPDDFHARFAAFERTYFYVLYVHPVRS
PLLDGRCGWLHTPLDLDAMRTAGQALVGEHDFSAFRSSECQAKTPVKHLYGIDIEQQGHF
FVFRFRASAFLHHMVRNIMGCLLAIGRGRQPASWMAHVLASLDRRQAAPTFMPDGLYLAR
VGYPERFAVPEPNWAAWPFPMPWARS
NT seq 801 nt   +upstreamnt  +downstreamnt
atgcgaatcgcactgggcatccattacgacggcacggcgttctccggctggcaatcgcag
ccgcacggcaacaccgtgcagcaggcgctcgaagccgcattgcgggaattcggcggcgtg
gcgttgcccacgacggtcgcgggccgcaccgacaccggtgtgcacggcattggtcaggtc
gtacacttcgacacggaactggaccgggcgatgttttcgtgggtgcgcggcgtcaacgcg
ttcctgccgaaaacggttgccgtgcaatgggcgcaggcgatgccggacgattttcacgca
cgattcgcggcgttcgagcgcacctacttctatgtgctgtacgtgcatccggtgcgctcc
ccgctgctcgacggtcgctgtggctggctgcacacgccgctcgatctcgacgccatgcgc
accgccggccaggcactcgtgggcgagcacgacttctcagcgttccggtcgtccgaatgc
caggcgaaaacgccggtcaagcatctctatggcatcgatatcgagcagcaggggcacttc
ttcgtgttccgctttcgcgcaagcgccttcctgcaccacatggtgcgcaacatcatggga
tgcctgctggcgatcggccgtgggcgccagccggcgagctggatggcgcacgtgctcgcg
agtctggaccgccgtcaggccgcgccgacgttcatgcccgatggcctgtatctggcacgc
gtggggtatcctgagcgtttcgccgtgcccgagcccaactgggctgcgtggccatttccg
atgccgtgggcccgttcatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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