KEGG   Pandoraea pnomenusa RB38: DA70_07060
Entry
DA70_07060        CDS       T03067                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
ppno  Pandoraea pnomenusa RB38
Pathway
ppno03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    DA70_07060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppno03400]
    DA70_07060
DNA repair and recombination proteins [BR:ppno03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     DA70_07060
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II
Other DBs
NCBI-ProteinID: AHN74256
UniProt: A0A856LFN6
Position
complement(2003956..2006628)
AA seq 890 aa
MKPTPPMTPMMQQYTRIKAEHPNMLVFYRMGDFYELFHDDAAKAARLLDLTLTARGQSGG
QPIRMAGVPHHAVEQYLGKLVKLGESVAICEQIGDPATSKGPVERKVVRIVTPGTLTDAA
LLSDKVDQYLLAVQVTAARRASERVAGLAWLSLASGELRLMEIAADKLPRELERIRPAET
LVPDSALEAFEGFSLGTTTRVPDWHFDTAAGTQRLRDQLGVASLTAFGCDGLNPALGAAG
ALLQYAAATQGQSLRHVQSLNVEREAAYIGLDAATRRNLELTETLRGTESPTLLSLLDTC
GTTMGSRLLRHWLHHPMRDQQVPQSRQLAIATLLEGPGAWRALNSELRNVADVERITARL
ALLTARPRDLSSLRDALRRLPELHTTLRAVEARSPLLAMLHEDLAIPDAALALLTSAIAE
EPAAMLRDGGVIARGHDAELDELRDISENCGQFLVDLETRERARTGINNLRVEFNKVHGF
YIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERSLAREKMLYDALLQ
DLLPHITEFKRIAQALAQLDVLAALAERAETLGWVKPELVEDRVVDIRQGRHPVVEQQVE
RFIANDCSLGDARRLLLITGPNMGGKSTFMRQTALIALLAYVGCYVPAEAVRLGPLDAIF
TRIGASDDLAGGRSTFMVEMTESAAILHTATEHSLVLMDEIGRGTSTFDGLALAWAIARH
LLGHNRCYTLFATHYFELTQLPDEFPQCANVHLSAVEHGEGIVFLHAVQDGPASQSYGLQ
VAQLAGVPMPVIRAARKHLALLEQQALDPAAPQLDLFAPRATLDDDRFTDDAVRSQDGAV
AHGTDHATLAPAAEATLARLAQIDPDDLRPREALDLLYELRGLMDGRANG
NT seq 2673 nt   +upstreamnt  +downstreamnt
atgaagccgacgcccccgatgacgccgatgatgcagcagtacacgcgtatcaaggccgag
catccgaacatgctcgtcttctatcgcatgggcgacttctatgagctcttccacgacgac
gccgcgaaggccgcacgcctgctcgatctcacgctcaccgcgcgcggccagtccggcggg
caaccgatccgcatggccggcgtgccgcatcacgcggtggagcagtacctcggcaagctc
gtcaagctgggcgagtcggtggccatctgcgagcagatcggcgacccggccacctcgaag
gggccggtggagcgcaaggttgtacgcatcgtcacgccgggcacgctgaccgatgccgcg
ctgctcagcgacaaggtcgatcagtacctgctcgccgtgcaggtcacggcggcacgtcgc
gcgagcgagcgagtcgccggtctcgcctggctgtcgctggcgagcggcgaactgcggttg
atggaaatcgctgcggacaagctcccgcgtgaactggagcgcattcgtccggccgagaca
ctcgtgcccgacagcgcactcgaggcgttcgagggattctcgcttggcacgaccacgcgc
gtgcccgactggcatttcgacacggccgccggcacccagcgcctgcgcgaccaactgggc
gtggcgagcctcaccgcattcggctgcgacggcctgaatccggcgctcggcgcggccggc
gccctgctccagtacgcagccgccacgcaagggcagtcgctgcgccatgtgcaaagtctg
aacgtggagcgggaggcggcctatattggcctggacgccgccacacgtcgcaacctggaa
ctcacggagacgctgcgcggcacggaatcgccgacgttgctctcgctgctcgacacctgc
ggcaccaccatgggcagccgtctgctgcgccattggctgcaccatccaatgcgcgatcag
caggtgccgcagtcgcgtcagctggccatcgccacgttgctcgaaggcccgggtgcgtgg
cgcgcattgaacagcgagctgcgcaacgtggccgacgtcgagcgcatcacggcgcgcctg
gccctgctcacggcgcgcccgcgcgacctgtccagcctgcgcgacgccctgcgccggctg
cccgagctgcatacgacgttgcgcgccgtggaagcccgctcgccactgttggccatgctg
cacgaggatctcgcgatccccgacgccgcccttgccctgctcaccagcgccatcgccgaa
gagccggctgcaatgctgcgagacggcggcgtcatcgcccgcggtcacgacgccgagctc
gacgagctgcgcgacatttcggagaactgcggccagttcctcgtcgacctggagacacgc
gaacgggcgcgcaccggcatcaacaatctgcgcgtggagttcaacaaggttcacggcttc
tacatcgaagtcacccgcgggcagacggacaaggtgcccgacgactaccgccgccgccag
acgctcaagaatgccgagcgctacatcacgcccgagctcaagaccttcgaggacaaggcg
ctgtccgcgcaggagcgctcgctcgcgcgcgagaagatgctttacgacgcgctgcttcag
gacctgctgccgcacatcaccgagttcaagcgcattgcccaggccctggcgcaactcgat
gtactcgccgcactcgcggaacgcgccgagacgctcggttgggtcaaacccgagctggtg
gaggaccgtgtcgtcgacattcgccaggggcgtcacccggtggtcgagcaacaggtcgag
cgcttcatcgccaacgattgttcgctcggcgatgcccgccgattgctgttgatcaccggc
ccgaacatgggcggcaagtcgacgttcatgcgtcagaccgcgctcatcgccctgctcgcc
tacgtcggctgctacgtgccggccgaagccgtgcgcctcggtccgctcgatgcgatcttc
acgcgcatcggcgcctcggacgatctggcgggcgggcgctccacattcatggtggaaatg
accgaatcggcggcgattctgcacacggccaccgagcacagcctggtgctcatggacgag
atcgggcgaggcacgtcgactttcgacggccttgcgctcgcctgggcgattgcacgccat
ctgctcggccacaatcgctgctacaccctgttcgccacgcactacttcgaactcacgcag
ttgcccgacgaattcccgcaatgcgcgaacgttcatctgtcggccgtggagcacggcgag
ggcatcgtgttcctgcatgccgtgcaggatggcccggcgagccagagctacggccttcag
gtcgcacagcttgccggcgtgccgatgccggtgattcgcgcggcgcgcaagcacctcgcg
ctgctcgaacagcaggcgctggatccggcggcaccacaactcgatctgttcgcgccgcgc
gcgacgctcgacgacgatcgcttcacggacgatgccgtgcggtcgcaagacggtgccgtt
gcccatggcaccgatcacgcgacgcttgccccggctgccgaagcgacgctggcccgcctg
gcgcaaatcgatcccgacgacctgcgtccgcgcgaagcgcttgacctgctgtacgaactg
cgaggcctgatggacggccgcgcgaacggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system