KEGG   Paenibacillus polymyxa M1: PPM_1874
Entry
PPM_1874          CDS       T01968                                 
Symbol
sucD
Name
(GenBank) succinyl-CoA synthase, alpha subunit
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
ppo  Paenibacillus polymyxa M1
Pathway
ppo00020  Citrate cycle (TCA cycle)
ppo00640  Propanoate metabolism
ppo00660  C5-Branched dibasic acid metabolism
ppo01100  Metabolic pathways
ppo01110  Biosynthesis of secondary metabolites
ppo01120  Microbial metabolism in diverse environments
ppo01200  Carbon metabolism
Module
ppo_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ppo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    PPM_1874 (sucD)
   00640 Propanoate metabolism
    PPM_1874 (sucD)
   00660 C5-Branched dibasic acid metabolism
    PPM_1874 (sucD)
Enzymes [BR:ppo01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     PPM_1874 (sucD)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig
Other DBs
NCBI-ProteinID: CCC84811
Position
2155222..2156151
AA seq 309 aa
MSILVDKHTKVITQGITGKTALFHAKGALDYGTQMVGGTSPGKGGTEVEITLENGQQVKL
PVFNTVSEAKEATGATASVIYVPPAFAADSILEAVDAELDLVICITEGIPVLDMIKVKRF
MEGKKTVLIGPNCPGVITPGECKIGIMPGYIHLPGHVGVVSRSGTLTYEAVHQLTTRGIG
QSSAVGIGGDPVKGSEFIDILHRFNEDPNTHAVIMIGEIGGTAEEEAAEWIRDNMTKPVV
GFIGGVTAPPGKRMGHAGAIISGGKGTAKEKIATLEACGIKVAPTPSEMGSTLVSVLEAR
GILNLCTTH
NT seq 930 nt   +upstreamnt  +downstreamnt
gtgagtattttggtcgataagcatacaaaggtgattacacaggggattacgggaaaaacg
gcgttgttccatgccaaaggtgcacttgattacggtacacagatggtaggtggcacctct
ccaggtaagggaggcaccgaggtagaaattacactggaaaacggacaacaggtcaaactg
ccagtgtttaacacagtaagcgaagccaaggaagctacgggcgcaactgctagcgtcatt
tatgtgccgccggctttcgcagcggattccattttggaggctgtggatgcggaactggac
ctcgtgatttgtatcacagaggggattccggtacttgatatgatcaaggtcaaacgtttt
atggaaggtaaaaagaccgttctgattggccctaactgtccgggcgttattacgccagga
gagtgtaagattggtatcatgccaggttacattcatctgcctggtcatgtaggcgttgtg
tcacgtagtggtactttgacctatgaggcagtgcatcagttaaccactcgaggtataggt
caatcttcagcggttggtattggcggtgacccagttaaaggttcggaattcatcgatatt
ttacatcgcttcaatgaggaccccaacactcacgctgtcattatgatcggagaaatcggt
ggtacagctgaggaagaggctgccgagtggatcagggataatatgacgaagccagtcgtt
ggttttatcggtggtgtgactgcgcctccaggcaaacggatggggcatgcaggcgccatt
atttctggcggaaaaggaacggcaaaagagaagattgcaacgcttgaagcctgcgggatc
aaggtggcaccgactccttccgaaatgggctcgacactggtaagtgtgttggaagcacgt
ggtattttgaacttgtgtacaacacattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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