KEGG   Paenibacillus polymyxa M1: PPM_2116
Entry
PPM_2116          CDS       T01968                                 
Symbol
yrhB
Name
(GenBank) cystathionine beta-lyase
  KO
K17217  cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
Organism
ppo  Paenibacillus polymyxa M1
Pathway
ppo00260  Glycine, serine and threonine metabolism
ppo00270  Cysteine and methionine metabolism
ppo00920  Sulfur metabolism
ppo01100  Metabolic pathways
ppo01110  Biosynthesis of secondary metabolites
ppo01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09100 Metabolism
  09102 Energy metabolism
   00920 Sulfur metabolism
    PPM_2116 (yrhB)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PPM_2116 (yrhB)
   00270 Cysteine and methionine metabolism
    PPM_2116 (yrhB)
Enzymes [BR:ppo01000]
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.1  cystathionine gamma-lyase
     PPM_2116 (yrhB)
    4.4.1.2  homocysteine desulfhydrase
     PPM_2116 (yrhB)
SSDB
Motif
Pfam: Cys_Met_Meta_PP Aminotran_1_2 DegT_DnrJ_EryC1 Aminotran_5 Met_gamma_lyase GDC-P Urease_gamma Beta_elim_lyase
Other DBs
NCBI-ProteinID: CCC85053
Position
2416181..2417311
AA seq 376 aa
MKRKTKLIHGGLPTDPHTGAVNVPIYQVSTYEQEEIGVHKGYEYSRTGNPTRFALEELIK
ELEEGTRGFAFGSGMAAIHAVFSLFKAGDHILLTDDVYGGTYRIVSKVLSRIGIESTFVD
TTDLEAISKAIRPNTKALYVETPTNPLLKVTDIRAVSELVKKHELLLIVDNTFATPYWQT
PITLGADIVVHSATKYLGGHSDVVAGLAVVNSEELGEQLHFLQNAIGGILGPQDSWLLIR
GIKTLGLRMEAIEKNAKEIAAFLEKHPKVSKVYYPGLESHAQHELSKIQAEGFGGIISFD
VGSDANAVALLKKVKYFTLAESLGAVESLISVPARMTHASIPAERRAELGITEGLVRISV
GIEDLEDLIEDLQSAL
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgaaacgcaaaacaaaactgattcacggtggactccctaccgatcctcatactggcgcg
gttaacgttcctatttatcaggtaagcacttatgagcaagaggaaatcggcgttcataag
ggatacgagtattcgcgtacaggcaacccgactcggtttgcactggaagagctgatcaag
gaactggaggaaggcacacgcggttttgctttcggttcgggtatggcagcgattcatgca
gtgttttccttgtttaaagcaggggatcatattttgctgaccgatgatgtatacgggggc
acttatcgtattgtaagcaaagtgcttagtcggatcgggattgagtccacatttgtggat
acaactgatctggaggctatttctaaagcaatccgtccgaatacgaaggcattgtatgtc
gaaacaccaacaaatccgctgttgaaagttactgatatccgcgcagtttcagaactggtg
aaaaagcatgagcttttgttgattgtggacaatacatttgctaccccttactggcagacg
ccaattacactcggggctgatatcgtcgtacactccgcaaccaaatatttgggtggacac
agcgatgttgtagccggtctggctgtagtcaacagtgaagagctgggcgagcagcttcat
tttctgcaaaacgccattggcggtattctcggtccgcaggattcatggttattgattcgt
ggtatcaaaaccttgggtctgcgtatggaagcaattgagaaaaatgcaaaggaaattgca
gcctttttggaaaagcatccgaaggttagtaaggtgtactaccctgggctggaaagccat
gcacagcacgagctgtccaaaattcaagctgaaggctttggcggcatcatttcctttgat
gtaggtagcgatgctaacgcggttgccctcctgaaaaaagtaaagtattttacattggct
gagagcttgggagcggttgaaagtctgattagcgttccagcacgtatgacgcacgcctcc
attccggcagaacgccgtgcagagctaggtattacagaaggcttggtacggatttcggtt
gggatcgaagatctggaggatttgatcgaagacttgcagtcagcattgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (2)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

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