KEGG   Paenibacillus polymyxa M1: PPM_2852
Entry
PPM_2852          CDS       T01968                                 
Symbol
yknU
Name
(GenBank) lipid A export ATP-binding/permease protein msbA
  KO
K18889  ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppo  Paenibacillus polymyxa M1
Pathway
ppo02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    PPM_2852 (yknU)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppo02000]
    PPM_2852 (yknU)
Transporters [BR:ppo02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    PPM_2852 (yknU)
SSDB
Motif
Pfam: ABC_membrane ABC_tran Zeta_toxin ABC_ATPase SMC_N DUF87 AAA_23 AAA KAP_NTPase AAA_29 DEAD AAA_21 AAA_14 AAA_18 AAA_19 nSTAND3 AAA_16 FtsK_SpoIIIE APS_kinase AAA_22
Other DBs
NCBI-ProteinID: CCC85789
Position
complement(3317261..3319036)
AA seq 591 aa
MEVLRQLQVFFRERRHYLFLSILCLAIATALGLVYPNLLQRLIDNAIIPGDFEKVPVLAL
TVLGVVIIKGFMQFLHGFFGGRLGNYLAYRLRNACYEKLQFLSFRYYDTAKTGDLMSRLT
GDLEAIRNFIGFGFAQLLNVLLMVVFGSIMMLYINWQLTLFTMISMPLLLFVTFKFESRI
HPTFQEMRIALSALTTAVQENITGVRTVKSFARESYEVEKFSVRNEQYKSNQIQAASLWS
RFFPAMELIASVSVVLLLGMGGYLVIQKSMTLGELVAFFSLIWYIIGPIWSIGFHINNYT
QSKASGERVLELLNQSVDVTDEADALTLNADQVKGHVTFDHVTFAYGNKLPAVVDINLDA
PPGSVIGILGGTGSGKSTIIQLLMRAYNVNAGSIKLDGTDIRHLKIRDLRAQISSVFQET
FLFSSSIRNNIAYGLSHVSMDDIIRVSKLAQAHEFITELPLGYDTVVGERGLGLSGGQKQ
RIAIARALLKNPKILVLDDATSAVDMETEHEIQSGFQEVMRGRTTFIIAHRISSLRHANE
IVVLEEGRIVQRGTHEQLIATPGPYQDVYHIQYADYIAEAPDGVSEGQVRP
NT seq 1776 nt   +upstreamnt  +downstreamnt
atggaagtgctcaggcaactgcaagttttttttcgtgagaggagacattatctatttctt
tccattctatgccttgcgatagcgacggccttgggactggtgtatccgaacctgctccaa
cggctcattgataacgctatcattcccggtgacttcgagaaagttccggttctggctctg
actgtactgggagtcgtgatcatcaaagggtttatgcaatttttacatggtttttttggt
ggacggctgggtaactatctggcgtatcgacttcgcaatgcctgttacgaaaagctgcaa
tttctgtccttcagatattatgacaccgccaaaacgggggatcttatgtcccgtctgact
ggtgatttggaggcgattcgcaactttatcgggtttggttttgcgcaactcctcaatgtg
ctactgatggtcgtattcggctctatcatgatgctgtatattaattggcagctcaccctc
tttacgatgatcagcatgccattgctactcttcgtcacattcaaatttgaatctcggatt
catcccacctttcaggaaatgcgaattgctctcagcgccctgacgacagcggtacaagaa
aatattacaggtgtgcgaaccgttaaatcttttgctcgcgaatcctatgaagtggaaaaa
ttctccgtacgtaatgagcagtacaaaagtaaccaaattcaggctgcttccttatggagt
cgattttttcctgcgatggaactgattgcctcggtcagtgtggttcttctcttgggcatg
ggtggatatctagttatccagaagtcaatgaccttgggggaactcgtcgctttctttagc
ttaatttggtatattatcggtcccatctggagcattggctttcatatcaataactatacg
cagtccaaagcttccggtgaaagggttttggagttgctgaatcagtctgtagatgtaacc
gatgaagctgatgcacttacactcaacgccgatcaggtgaagggacatgtgacgtttgat
catgttacctttgcttacggaaataagctacctgctgttgttgacatcaatctggatgcg
ccaccgggatcggttattgggattttaggaggaacaggttccgggaagtcgaccattatt
caactactcatgcgagcctacaatgtgaatgcaggaagcatcaagctggatgggacggat
atacgtcatttgaaaattcgcgatttacgtgctcaaatttcttctgtgtttcaggagacg
tttctgttctcgtcctctatacgcaacaatattgcatatgggttaagtcatgtcagtatg
gatgacatcatacgtgtttccaagctggctcaggcgcatgaattcataactgaattaccg
ctgggctacgacactgttgttggtgaacgtggattgggactgtctggagggcagaaacaa
cggatcgccatcgcgcgcgcactactcaaaaatccgaaaattctcgtgctggatgatgct
accagtgcggtcgacatggagacggagcatgaaattcagtccggttttcaagaggttatg
cgtggacgcacaacgtttattatagctcatcgaatctcttcgcttcgtcatgccaatgaa
attgtagtgcttgaggaaggacgaatcgtccaacgtggaacacatgaacagctcattgct
actccaggtccatatcaagatgtgtatcatattcaatacgccgattacatagcggaggct
ccagacggtgtatccgaagggcaggtgagaccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (27)   

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