KEGG   Paenibacillus polymyxa M1: PPM_3419
Entry
PPM_3419          CDS       T01968                                 
Symbol
yccW
Name
(GenBank) UPF0064 protein
  KO
K06969  23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Organism
ppo  Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppo03009]
    PPM_3419 (yccW)
Enzymes [BR:ppo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     PPM_3419 (yccW)
Ribosome biogenesis [BR:ppo03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PPM_3419 (yccW)
SSDB
Motif
Pfam: PUA_3 Methyltrans_SAM Methyltransf_31 Met_10 Cons_hypoth95 Methyltransf_25 PrmA MTS TRM Methyltransf_11 Methyltransf_12 PUA Methyltransf_18 Methyltransf_15 Ubie_methyltran FtsJ Methyltransf_24 DTP-pb9_B-dom UPF0020 UPF0113 Spermine_synth
Other DBs
NCBI-ProteinID: CCI70228
Position
complement(3971845..3973224)
AA seq 459 aa
MPSVILERSRKKRLEQAHPWVFKNEIAKIEGDPEAGDLVNILNHQGRYLATGYYNPASQI
TVRVMSYEPLEVMDQSFFAQRFRNCLEHRERFVTGGNAYRLVYGEADFLPGLIVDRFGDV
LVVQLLTLGMDRRREEIRDALVEVMGPVGIYERSDVSIRELEGLEQTKGPLYGDCPRHVV
VTENGLQIKVDIEEGQKTGYFFDQRENRAAIAPLMTGWGARSGITLQEVAATPGDDATTV
MKPVNKSGKVVEFPFWDGATVLECFSHTGSFTLNACKHGAKKVTCLDISEHAIESARDNV
KLNGFEDRVEFVVDDAFQYLRNQVKGVEERTARAGGKGDTSKPLTAGGGRTFDVVILDPP
AFAKTKSAVKGATRGYKDINLHGMKLVNEGGYLVTASCSFHMRPELFLDTIKEAATDAGK
TLRLVDWRAAGKDHPQILGVEEGHYLKFAIFEVRSRTRL
NT seq 1380 nt   +upstreamnt  +downstreamnt
ttgccttcagtaatattagaacgtagccgcaaaaaaaggctggagcaagcacacccttgg
gtgtttaaaaatgaaatagccaagattgagggtgatccagaagcaggtgatttggtcaac
atccttaaccatcaaggtcgttatttggcgacaggttactataatcctgcttcgcaaatt
acagtgcgtgtgatgtcctatgagccgctggaagtgatggaccaaagcttctttgcccaa
cgtttccgtaattgtttggagcatcgcgaacgctttgtgactggggggaacgcttatcgc
ttggtgtacggcgaggctgattttttgcctgggctgattgtagaccgttttggtgatgta
ttggtcgttcagctgttaacgcttggcatggatcggcgcagggaagaaatcagagatgcg
cttgttgaagtcatggggccagttggtatatatgagcgtagtgatgtatccatccgcgag
ctggaagggttggaacagacgaaaggtcctttgtacggcgattgcccgcgccatgtggtg
gtgacggaaaatggcttacaaatcaaggtcgatatcgaagagggccaaaagactggctat
ttctttgaccagcgtgaaaatcgcgcggctatcgcgccgttgatgacaggttggggagcg
cgtagcggaattacgttacaagaagtagctgcaaccccaggcgatgacgccacaacggtc
atgaagcctgtgaataaaagtggtaaggtggttgaattcccattctgggacggcgcaact
gtattggaatgtttttcacatacaggtagctttacgctcaatgcgtgtaaacatggtgcg
aaaaaagtaacttgtctggatatttctgaacatgcgattgaaagtgctcgggataacgtg
aagctgaacggttttgaggatcgcgtcgagtttgtcgtcgacgatgcttttcaatattta
cgtaatcaggtgaaaggtgtagaggaacgcaccgcgcgagcggggggcaaaggagataca
tccaagccgctgactgcgggtggcggacgcacctttgacgtagttattctggatccgcca
gcttttgccaaaacgaagagtgctgtcaaaggagctacacgtggatataaagatatcaac
cttcatgggatgaagcttgtcaatgagggcggttatttggtaacggcgagttgttcgttc
catatgcggccagagctgtttttggacacgattaaggaagcggcgacagatgccggtaaa
accctccgactggtagattggagagcggcagggaaggaccatcctcaaattttaggtgtg
gaggaaggtcattatttgaaatttgccatctttgaagtgcgcagccggacacggctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (21)   
   Pfam (21)   
All databases (29)   

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