KEGG   Paenibacillus polymyxa M1: PPM_p0169
Entry
PPM_p0169         CDS       T01968                                 
Symbol
dcm1
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
ppo  Paenibacillus polymyxa M1
Pathway
ppo00270  Cysteine and methionine metabolism
ppo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    PPM_p0169 (dcm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppo03000]
    PPM_p0169 (dcm1)
   03032 DNA replication proteins [BR:ppo03032]
    PPM_p0169 (dcm1)
   03036 Chromosome and associated proteins [BR:ppo03036]
    PPM_p0169 (dcm1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppo02048]
    PPM_p0169 (dcm1)
Enzymes [BR:ppo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     PPM_p0169 (dcm1)
Transcription factors [BR:ppo03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    PPM_p0169 (dcm1)
DNA replication proteins [BR:ppo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    PPM_p0169 (dcm1)
Chromosome and associated proteins [BR:ppo03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    PPM_p0169 (dcm1)
Prokaryotic defense system [BR:ppo02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    PPM_p0169 (dcm1)
SSDB
Motif
Pfam: DNA_methylase Pyridoxal_deC GLF Cloacin
Other DBs
NCBI-ProteinID: CCC86319
Position
pPPM1a:221782..223272
AA seq 496 aa
MKESIKRLYKIKNRLYIEAKYLATFGFNIGQAIKYEIDKTNKKITVVPTQNARKHVAKTT
QKSGMSVPVIDIKAEEVKDFFSKQQKIEVEIQQGKIVFTVLESTLEATNVIDFEAAKSLK
LIMQKKQYLVNLEEFGKVVNYQQIDLLDLLHAEKNDIQDSMSGQASLKIKEKAIRMMSLF
SGCGSIDKAFIEENYNIIFANDRFVSRALRDNHIQTYRNNIGDHIIMRDVMEFTKEDIPE
VDFLAAGIPCVDFSNLNVIKNFRDEESMQHPLVEQTLNIINWSKCKGFLIENVERFLTVK
GGIMIKRFKERLNKFNIITRVIDATSLGSPQKRKRAFILGLQGADPNLDIPHLAQLTTVG
DAFKNIEGKPQQDMYFTPTTKTLERMKHVPQGGNINSVPIELRSKKKKFSNFCQRLDLNG
YAPTITHVQDEVFIHPLLNRYLTVRETARLFSLPDDFIFSGPLTSIFEMLKNCVDFKVSL
FLARTIRKQLTPLLHS
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgaaagaaagcataaaaaggctgtataaaattaagaatcgtttatatattgaagctaaa
tacttggccacattcggatttaatataggtcaggctatcaagtacgaaattgataaaact
aataaaaaaatcacagttgttcctacccaaaacgcaagaaagcatgttgctaaaaccact
caaaaatcgggaatgagtgttcctgtcatagatataaaagcggaagaggttaaagatttt
ttctccaaacaacaaaaaatcgaggtagaaattcagcaagggaaaattgtatttacagta
ttagaatccactttagaagctactaatgttattgatttcgaggcagcaaagagtctaaaa
ctcataatgcaaaaaaaacagtaccttgttaatctcgaggaattcggaaaagtcgttaac
taccagcagatagatttactcgatctacttcatgctgagaagaatgacattcaagattct
atgagtgggcaagctagcttaaagattaaagaaaaagcaattagaatgatgagtctgttc
agcggttgtggctccattgataaagcattcatagaggaaaattataatataatttttgcg
aatgatcgatttgtaagcagagcattaagggataaccacatacagacatatcgcaacaat
attggtgatcatatcattatgcgtgatgttatggaattcactaaggaggatatccctgaa
gttgacttcttagcagctggtataccttgtgttgattttagtaatttgaatgtaatcaaa
aattttagagatgaggagtctatgcaacatccattagtcgaacagactcttaatataatt
aactggagcaagtgtaagggttttttaatcgaaaatgtagagcgatttcttactgtaaaa
ggtgggattatgataaaaagatttaaagagcgattaaacaagttcaatataatcactcgt
gtgattgatgctacttcactagggtctcctcagaaacgcaaaagagcctttattctgggc
ctacagggggcagaccctaatttagatatacctcaccttgcacaactaactacagtaggt
gatgcatttaagaatattgaaggtaaaccacaacaagacatgtactttacacctacaact
aaaacgcttgagcgtatgaaacatgttccacaaggaggaaacattaactcagttcccatt
gagctgcgttctaaaaagaaaaaattttcaaatttctgtcaacgtcttgatttaaatggc
tatgcgccaacgataactcatgttcaggatgaagtattcattcatcctcttttgaatcga
tatttaacagtacgagaaactgctagattatttagtctaccagacgattttatatttagc
ggaccactgacaagcatatttgaaatgctaaaaaattgtgttgattttaaagtatcacta
tttttagccagaaccattaggaagcaactgacacctttgctgcactcataa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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