KEGG   Pectobacterium polaris: BJK05_00480
Entry
BJK05_00480       CDS       T05195                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
ppoa  Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:ppoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppoa03032]
    BJK05_00480
   03036 Chromosome and associated proteins [BR:ppoa03036]
    BJK05_00480
   03400 DNA repair and recombination proteins [BR:ppoa03400]
    BJK05_00480
DNA replication proteins [BR:ppoa03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BJK05_00480
Chromosome and associated proteins [BR:ppoa03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BJK05_00480
DNA repair and recombination proteins [BR:ppoa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BJK05_00480
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: ASY78558
Position
120782..121054
AA seq 90 aa
MNKSQLIDKIAADADISKAAAGRVLDAIIGSVTESLKEGDDVALVGFGTFSVRERAARTG
RNPQTGKEISIPAAKVPGFRAGKTLKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtcacaattgatcgacaaaattgccgcagatgctgatatttccaaagcggca
gcagggcgtgtgttggatgcaattattggttccgttaccgaatccctgaaagaaggggat
gatgttgctttggttggttttggtactttctcagtgcgtgaacgtgctgctcgtaccggc
cgtaacccgcaaactggtaaagaaatcagtatccctgcggcgaaagtaccaggattccgt
gctggtaaaacgctgaaagacgccgttaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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