KEGG   Paenibacillus polymyxa Sb3-1: RE92_08040
Entry
RE92_08040        CDS       T03812                                 
Name
(GenBank) [Fe-S]-binding protein
  KO
K18979  epoxyqueuosine reductase [EC:1.17.99.6]
Organism
ppoy  Paenibacillus polymyxa Sb3-1
Brite
KEGG Orthology (KO) [BR:ppoy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppoy03016]
    RE92_08040
Enzymes [BR:ppoy01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.99  With unknown physiological acceptors
    1.17.99.6  epoxyqueuosine reductase
     RE92_08040
Transfer RNA biogenesis [BR:ppoy03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    RE92_08040
SSDB
Motif
Pfam: DNA_binding_1 Fer4_16 QueG_DUF1730 HEAT_2 Methyltransf_1N HEAT_PBS HEAT_EZ Fer4_10 Fer4_7 Fer4 HEAT Arm Fer4_9 Fer4_6 Fer4_2
Other DBs
NCBI-ProteinID: AJE51018
Position
complement(1842547..1844280)
AA seq 577 aa
MQRELTRTATGTASTWASLKQEIIEAAPGLGIDSIGFASADPFLSLKAILEEHRAKGYES
GFEEPDIDKRIYPELYGSQPASLIAIAVAYPSKMKDPPKSDKGKYRGILARSAWGKDYHL
VLREAMEKLEAFISERVPDAVLKNMVDTGELSDRAVAERAGIGFSGKNTMMISPTLGSWI
YLGELLTNIPFQPDEPVTDGCGECTKCLDACPTDALVGPGQLNAQRCVSFLTQTKGFLDE
EFMLKIGNRLYGCDTCQIVCPKNRGLNWDHHPELTPDPEIVKPLLLPLLDLSNREFKDRF
GQSAAAWRGKKPIQRNAVIGLGNFKDVSAVPKLTEVLLDDPRPELRGTAAWALSRIGGEN
AMTAIKQASEKEQHEQVREMIAQAHSKLEEQEQAEQQTSAELKTEDSQGPTTIYYDEMET
PVGTLTLCATDRGLCRIDYGSFYAKEALLQQWARTWVGEYVYVQEPEKLREAAEQLREYF
AGERREFSIAYDLRGTPFQEQVWRALQNIPYGQSVSYQDIAESIGRAKAVRAVGGANNKN
PLPILFPCHRVSGANGSLVGYAGGLPVKMKLLELEKE
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgcaacgcgaattaactcggacggctaccgggacggcttcgacttgggcttcgctcaag
caggaaattattgaggcagctccagggctgggtatcgactccatcgggttcgcatccgcc
gatccctttctgtctctgaaagctatattggaagagcatcgtgctaaaggctatgagtcc
ggctttgaagagcccgatattgataagcgcatctatccggagctgtatggctcgcagcct
gcatccctgattgccattgcggtggcgtatccttccaaaatgaaggacccgccgaagtcg
gacaagggcaagtaccgtggtattttggcgcgttcagcctggggtaaagattatcatctg
gtattgcgtgaagcgatggaaaagcttgaggcttttataagtgagcgggtacctgatgca
gtgttaaaaaacatggtggataccggagaactgtcggatcgagctgttgcggaacgcgca
gggattggctttagcggcaaaaatacgatgatgatttcaccgacactgggatcatggatt
tatctgggggagctgttgacgaacattccttttcagccagatgaaccggttacggatggt
tgcggagagtgcaccaaatgtttggatgcatgtcctaccgacgcgcttgtaggtccggga
cagctgaatgcccagcggtgtgtgtcctttttgacgcaaaccaagggctttttggacgag
gagtttatgctgaaaatagggaatcggctgtatggatgtgatacgtgccaaatcgtatgt
cccaaaaatcgaggccttaactgggatcatcatcccgagcttacacccgatcctgaaatt
gtgaagccgttgctgttaccgttactggatttgagcaatcgtgaattcaaagaccgattt
ggtcaaagtgcagcggcttggcgggggaagaagccgattcaacgcaatgcagtcattggt
cttggcaatttcaaggatgttagcgcggtgcccaaattgacggaggttttattggatgat
ccgcgtcccgagctgagaggcacggcggcgtgggctttgagtcgaataggaggggaaaac
gctatgacagcgatcaagcaagcatcagagaaagaacaacatgagcaagtacgcgaaatg
atcgcacaggcgcattccaagctagaggaacaagagcaggcagaacagcaaacttctgct
gaattaaagacggaggattcacagggtccaactacgatttattatgatgaaatggagacg
cctgtgggcacgctgacgctgtgtgctacggatcgtgggctatgtcgaattgactatggc
tctttttatgcgaaggaagcattgcttcagcaatgggcccggacatgggtcggggaatat
gtctatgtacaggagccggaaaagctgcgcgaagctgcagaacaactacgtgaatatttt
gcgggagaacgacgggaattcagtatagcctatgatttgagaggcactccttttcaagag
caggtatggcgcgcactgcaaaatattccgtacggacaaagtgtgtcctatcaagatatt
gcagaatcgatcggacgagccaaggcggtacgtgctgtcggcggagccaataacaaaaat
ccattgccaatcctgtttccatgtcacagggtatcaggtgcaaatggaagtttggtcggc
tatgccggaggcttgccagtcaagatgaagctgctggaattggagaaggaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (29)   

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