KEGG T03812: RE92

Paenibacillus polymyxa Sb3-1: RE92_17805

Entry

RE92_17805        CDS       T03812

Symbol

valS

Name

(GenBank) valine--tRNA ligase

K01873

valyl-tRNA synthetase [EC:6.1.1.9]

Organism

ppoy Paenibacillus polymyxa Sb3-1

Pathway

ppoy00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:ppoy00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RE92_17805 (valS)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ppoy01007]
    RE92_17805 (valS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppoy03016]
    RE92_17805 (valS)
Enzymes [BR:ppoy01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     RE92_17805 (valS)
Amino acid related enzymes [BR:ppoy01007]
Aminoacyl-tRNA synthetase
  Class I (U)
   RE92_17805 (valS)
Transfer RNA biogenesis [BR:ppoy03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    RE92_17805 (valS)
Prokaryotic type
    RE92_17805 (valS)

SSDB

Motif

Pfam:

tRNA-synt_1 Anticodon_1 tRNA-synt_1g Val_tRNA-synt_C tRNA-synt_1_2 tRNA-synt_1e DUF5915 tRNA-synt_1f tRNA-synt_1b CCDC-167 YlqD GapR_DNA-bd ABC_tran_CTD

Other DBs

NCBI-ProteinID:

AJE52771

Position

4027611..4030277

AA seq 888 aa
MSEQDNKTTLEMPTTYDPKSAEQKWYKTWMEKGYFRAGQHPEAEPFTIVIPPPNVTGMLH
IGHALDFTLQDIIIRAKRMQGYDALWLPGADHAGIATQTKVEQKLREEGLTRYDLGREKF
LEKVWEWKDLYLDNIHNQWEKMGFSLDYSRERFTLDEGLSKAVREVFVKLYKKGLIYRGK
RIINWDPAARTALSDIEVEYKEVNGNLYHLQYPLKDGSGFITVATTRPETMLGDTAVAVH
PEDERYKQMIGKTLVLPIIGREIPVIADDYVDKDFGSGAVKITPAHDPNDFEMGQRHQLP
QITVMDETGTMNAEAGKYQGLDRSDCRKQIVADLKEQGVLIRIEEHVHQVGHSERSGVVV
EPYLSTQWFVEMKPLAAKAIEAQKAGNGVNFVPDRFERTYLHWIENVRDWCISRQLWWGH
RIPAWYDEETGEVIVSAEDPTTLPEYAGRKLKQDEDVLDTWFSSALWPFSTLGWPEQTED
LKRYYPTNVLVTGYDIIYFWVSRMIFTALEFTEEIPFKDVLMHGLVRDADGRKMSKSLGN
GVDPLDVIEQYGTDAMRYMISTSSTPGQDLRFRWERVEQARNFANKIWNASRFALMNLEG
VTAADIDITGDLSTVDRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDLCDWYIE
FAKLSLYGDNAEAKKKTQSVLAYVLDRTLRMIHPFMPFISEEIWQHLPHEGETITLAAWP
AYDPAFEDKDAVAEMNLLIDVIRAVRNIRAEVNVPMSKKIELLIKPGDQAVLDIINRNGE
YVRRFCNTSEFDAGLEFTAPDKAMTSIVSGAELYLPLAGLLDIAQEISRLEKELQHLNSE
VERVEKKLSNQGFVAKAPAKVIEEEKAKQADYSDKRAKVIARIEELKG

NT seq 2667 nt +upstreamnt +downstreamnt
atgtcagaacaagacaacaagacaaccttggaaatgccaacaacgtatgatcccaaatca
gcagaacaaaaatggtacaaaacgtggatggagaagggctatttccgcgccgggcaacat
ccagaggcagagccttttacaatcgttattccaccacccaatgttacgggtatgttgcat
attggacatgctcttgactttactttgcaggatattattatccgcgccaagcggatgcag
ggttatgatgccttgtggctgccaggggcagaccatgcaggtattgctactcaaacaaaa
gtagagcagaagctgcgtgaagaaggcctgactcgctatgatttgggccgtgagaagttt
ttggaaaaagtgtgggagtggaaggatctttatctggacaatatccacaaccaatgggaa
aaaatgggcttttctctcgattattctcgtgaacgttttacattggatgagggactgtcc
aaagcggtacgcgaagtattcgttaaactgtacaaaaagggcctgatttatcgcggtaaa
cgcatcattaactgggaccctgctgcacgtactgcgttgtcggatattgaggtggaatac
aaagaggtgaatggaaatctgtatcacctgcaatacccactgaaagacggtagcggattt
attactgtagccaccacacgtccagaaacgatgctgggcgatacggctgtagctgtacat
ccggaagatgaacgctacaagcaaatgatcggcaaaacgcttgtgcttccaatcatcggg
cgtgaaattccggtcattgcggatgactatgtggataaagatttcggtagcggcgctgtt
aaaatcacaccggctcacgatccgaatgactttgaaatgggacaacgtcaccagttgcca
caaattacggtgatggacgagacgggaaccatgaatgctgaagcaggcaaatatcaggga
ctggatcgcagcgattgccgtaagcaaatcgtcgctgatttgaaagagcagggtgtacta
attcgtattgaagagcatgtacaccaagtaggccatagtgagcgttcaggtgtagttgta
gaaccttatctgtccacccaatggttcgtggaaatgaagcctctggcagctaaggcgatt
gaagcacagaaggctggcaacggtgtaaactttgtgccggatcgctttgagcgtacttat
ctgcattggattgaaaatgtgcgagattggtgtatttcccgtcaattatggtggggacac
cgtattccggcttggtatgatgaagaaaccggagaagtgattgtatcggcggaggaccct
accactttgcctgaatatgctggtagaaagctcaaacaggatgaggatgtactcgatact
tggttcagctctgctttgtggccgttttcgaccctgggttggcctgagcagacagaggat
ctcaaacgctattatccgactaatgttctagttacaggctacgacattatttatttctgg
gtatcgcgtatgatttttaccgcgctggaatttacggaagagattccgttcaaggacgta
cttatgcacggtctggttcgtgacgcggacggaagaaaaatgtccaaatccctaggcaat
ggtgttgatccgctcgatgtgatcgaacaatatggtaccgatgctatgcgttatatgatc
tccaccagcagcacgcctggacaagaccttcgtttccgctgggaacgtgtggagcaggcg
cgtaactttgccaataaaatctggaatgcatcacgttttgcgctgatgaatctggaaggc
gtcactgcggcagatatagacattaccggtgacttgagcaccgttgatcgttggattctg
caccgtctaaacgaaacttcacgcgacatcacgcgtctaatagatgcttatgaatttggc
gagacaggccgccttctgtacaactttatttgggatgatttgtgcgactggtacattgag
tttgcgaagctttccctatatggcgataatgcagaggcgaaaaagaaaacacaatccgtc
cttgcctatgttttggatcggacactgcgcatgattcatccgttcatgccttttatctcc
gaggaaatatggcagcatcttccgcatgagggagaaacgatcacactggctgcttggcct
gcttacgatcctgctttcgaggataaggatgcggtcgctgaaatgaatttgctgatcgac
gtgattcgtgctgtgcgcaatatccgcgctgaagtcaacgtgccgatgagtaaaaaaatt
gaattgctcataaaacctggcgatcaagccgttcttgatatcattaaccgcaatggggag
tatgtacgtcgattctgtaatacgtctgaattcgacgcgggattagagttcaccgctcca
gataaagccatgacatctattgttagcggcgcagagctatacctgccgttagccggactg
ctagatattgcccaggaaattagcagactcgaaaaagaacttcagcatttgaacagtgaa
gtggagcgcgtggagaaaaagctctccaaccaaggcttcgtggcaaaggcaccagccaaa
gtcatcgaggaagagaaggccaagcaagccgattactcagataagcgcgctaaagttatc
gcacgtattgaagaactcaagggataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (30)   

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