KEGG   Physcomitrium patens (spreading earthmoss): 112277611
Entry
112277611         CDS       T01041                                 
Name
(RefSeq) ABC transporter E family member 2
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppp03009]
    112277611
Ribosome biogenesis [BR:ppp03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    112277611
SSDB
Motif
Pfam: ABC_tran RLI SMC_N AAA_21 Fer4 AAA_15 AAA_22 Fer4_6 AAA_16 AAA_29 AAA AAA_33 NACHT RsgA_GTPase Fer4_9 Fer4_2 TsaE AAA_23 Fer4_21 nSTAND3 Rad17 SRP54 Fer4_10 Fer4_7 Fer4_4 TniB AAA_24 AAA_5 Fer4_16 Fer4_8 Fer4_17 Cas6_N
Other DBs
NCBI-GeneID: 112277611
NCBI-ProteinID: XP_024365922
Position
25:complement(1250130..1255426)
AA seq 605 aa
MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTSQAKLAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFLSPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
KGNVGEVLAQKDEREMRFELAKDLDLNQVLDRDVGDLSGGELQRFAIAVVATQHAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIRTYARYKYPQMTKTQG
GFKLQVKEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDDVGDSDVEVPEFNVSYKPQ
KISPKFTSTVRHLLHQKIRDSYMHPQFNTDVMKPLQIEALMDQEVIHLSGGELQRVALCL
CLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTSFVVEHDFIMATYLADRVIV
YEGQPSIDCIANTPQSLLTGMNLFLSHLDITFRRDPTNYRPRINKRDSTKDREQKNAGSY
YYLDD
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgtcggatcgattgactaggattgctattgtgagctcggatagatgcaagccaaagaaa
tgtcggcaggagtgtaagaagagttgtcctgtggtgaagacaggtaaactttgcattgag
gttacctcgcaagccaaacttgcgttcatttctgaggagctctgtatcggttgtggtatc
tgtgtaaagaaatgtccttttgaagccatccaaatcatcaatctgccgaaggaccttgac
aaggataccactcatcgttatggtcccaataccttcaagctgcacaggttgcctgttcca
agacctggacaagttctgggacttgttggaacgaatggtattgggaagtcaactgcccta
aaggtgttggctggaaaacttaagccaaaccttggaaggttccttagtccacctgattgg
caagaaattttgacgtattttcggggttcagaactccaaaattattttactcgaattttg
gaggacaacttgaaggcaattatcaagccgcaatatgtcgaccacatccccaaggctgtc
aagggtaatgtgggtgaagttcttgctcagaaagatgagagagagatgagatttgaactg
gcgaaggacctcgacctgaaccaggttcttgaccgtgatgttggtgacctttctggagga
gagttgcagcgctttgctattgctgttgtggcgacgcagcatgccgaaatatatatgttt
gatgagccttcaagttatctcgacgtaaaacaaaggttgaaagctgcccaagttgttcga
tctcttcttcgtcccaacagttacgtcatcgtagtggagcacgacttgagcgtgttggat
tatctgtctgattttatctgctgcctttacgggaagcctggagcgtatggggtagtgact
ttgcctttctctgttagagagggcatcaacatctttttggctggttttgttcctactgaa
aatttgagatttagggatgagtcccttaccttcaaggttgctgagactcctcaggagagt
gccgaggagattcggacgtatgcacgatacaaataccctcaaatgacaaagacgcaaggt
ggttttaagctgcaggtcaaggaaggagagtttactgattctcaaattattgtcatgctt
ggagagaatggaactggcaagacaacattcatccgaatgctggcaggtttacttaaacca
gatgatgttggcgatagcgatgtggaggttccagagttcaatgtgtcttacaaacctcaa
aaaatcagtcctaagtttacatctacagtacgacatcttttgcaccagaagatcagagac
tcctacatgcacccacagttcaacacggatgtgatgaagcctttacagattgaagccctg
atggaccaggaagttattcatctctcgggaggagagcttcaacgtgtggctctgtgtctc
tgccttggcaagcccgcagacatatacctgattgatgagccgagtgcatatctcgattca
gagcagcgtattgtagcagccaaagttattaagagatttattcttcatgcaaagaagaca
tcgtttgtggtggagcatgatttcataatggcgacgtacttggctgacagagtaattgtg
tacgagggacaaccgtctattgactgtatagcaaatacccctcagagcttgctgacggga
atgaatcttttcctctcgcacttggacatcactttccggcgtgacccaaccaactacagg
ccccgtatcaacaagcgtgattcgacgaaggatagggaacaaaagaacgcagggtcttac
tactacttagatgactga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (32)   
   Pfam (32)   
All databases (41)   

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