KEGG T01041: 112279976

Physcomitrium patens (spreading earthmoss): 112279976

Entry

112279976         CDS       T01041

Name

(RefSeq) chaperone protein ClpC1, chloroplastic-like

K03696

ATP-dependent Clp protease ATP-binding subunit ClpC

Organism

ppp Physcomitrium patens (spreading earthmoss)

Brite

KEGG Orthology (KO) [BR:ppp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ppp03110]
    112279976
Chaperones and folding catalysts [BR:ppp03110]
Heat shock proteins
  HSP100
   112279976

SSDB

Motif

Pfam:

AAA_2 Clp_N AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 Sigma54_activat UVR nSTAND3 TniB AAA_18 NACHT AAA_14 Zeta_toxin AAA_28 IstB_IS21 AAA_25 DNA_pol3_delta2 AAA_23

Other DBs

NCBI-GeneID:

112279976

NCBI-ProteinID:

XP_024370582

Position

3:12823747..12830319

AA seq 933 aa
MAAVTQSLMVPAVGASHGQIHSSNKSQTPARVGPLGRKKAQIKNSSVPSTRIQSFSGMRK
ASVIDALTVKQGRDFKSTVAAALAVDNQEGTSKGVITAMFERFTEKAIKVIMLAQEEARR
LGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIGRGSGFVAVEIPFTP
RAKRVLELSLEEARQLGHNYIGTEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMV
GESTESVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRT
KNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLDMGLLVAGTKYRGEFEER
LKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
RKHIEKDAALERRFQPVLVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQ
YISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELDKELRGVTKEKNEAVRGQDFEKAG
ELRDREMELKAQISAITQKGKEQMKAESEAGDTGPTVEESDIQHIVSAWTGIPVEKVSSD
ESDRLLKMEDTLHQRVVGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL
AKALASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVV
LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGGGIGF
QLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKLEVKEIADIMLKEVF
ERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLAGEIKEGDS
AIIDVDSEGGVTVLNGTTGSSSSTAIEAPAGIA

NT seq 2802 nt +upstreamnt +downstreamnt
atggcggctgtgacacagtccttgatggttccggcagtgggagcatcccatggccaaatt
catagtagtaacaaatctcaaacgccagcaagggtgggtcctctaggcaggaaaaaagcg
cagattaagaattcttcagtgcccagcacaaggattcagtcgttttctggaatgcgtaag
gcttcagtaattgatgctttgactgtgaaacaaggacgggatttcaaatccactgtggca
gctgcgcttgcggtggataatcaagaagggacctccaagggtgtcattacggcaatgttc
gaacgatttaccgagaaggccatcaaggttatcatgttggctcaggaagaagccaggcgt
ttagggcacaactttgttggtacggagcagattctcctaggccttatcggagaggggact
ggaattgctgctaaggtgttgaagtccatgggtgtaaaccttaaggaggctcgtgtggag
gtagagaagatcattggccgtggtagtggttttgtggctgttgagattccgttcacaccc
agagctaagcgagtccttgagctgtcacttgaggaagctaggcagctcggtcacaattat
ataggaaccgagcatctcctcctgggtttgttgcgggagggtgaaggtgttgccgctcgt
gtccttgaaaacctcggagcagaccctagcaatatacggactcaagtaattcggatggtt
ggcgagagtactgagtctgtaggtgctggagtgggtggtggtagcagtggcaataagatg
cctactttggaggaatacggtacaaatttaacgaagcttgctgaagaggggaagttggac
cctgttgttggaagacagccgcaaattgagcgtgtgactcaaattttgggccgaaggaca
aagaataacccttgccttattggagagcctggagttggaaaaactgcaattgctgaagga
ttggctcaacgtattgcaactggcgatgtgcctgaaaccattgagggcaagaaagttatc
accctggatatgggattgttggtagctggtacaaagtacaggggagaatttgaagagagg
cttaagaagttgatggaagagatcaaacaagctgacgacattatccttgtgattgatgaa
gtacatacacttattggtgctggtgctgctgagggtgctattgatgcagctaacatcttg
aagcctgccctcgctcgtggtgaactccagtgtatcggagctaccacattggacgaatat
aggaagcatattgagaaggatgctgcattggaacgtcgattccagcctgtgttggttcca
gaacccactgttgatgagaccattcaaattcttaagggattgagagagagatatgaaatt
catcacaagctgcgttacactgatgaggctttggtagcagcagcacaactttcttatcaa
tacatcagtgatcggtttttgcctgacaaggccatcgacctgattgatgaagctggatca
cgcgtacgtctaaggcacgctcagctacctgaagaagctagagagcttgacaaggagctg
cgcggtgtcaccaaggaaaagaatgaagctgttcgtgggcaggatttcgagaaggctgga
gagttgagggatcgagaaatggagcttaaggctcaaatttctgctattactcagaagggc
aaagagcagatgaaggcagagagtgaggctggtgataccggtcctactgttgaagagtca
gatattcagcatattgtttcagcctggaccggtatccctgtagagaaagtctctagtgat
gagtctgaccgtttgttgaagatggaggatacccttcatcaacgagtcgtcgggcaggac
gaagctgtaaaagccatcagccgtgctattcgcagagctcgtgttggacttaagaatcca
aaccgtcctatcgcaagttttatcttctctggacccactggtgttggaaaatctgagcta
gcgaaggctcttgcctcgtactactttggctcggaagaagctatggttagactcgatatg
tctgagtttatggagagacacactgtatctaaacttattggttctccacccggttatgtc
gggtacagcgaagggggtcagttaacagaagctgttcgcaggaggccgtacacagttgtt
cttttcgatgagattgaaaaggcacatcctgatgtgttcaacatgatgcttcagattttg
gaagacggtcgtctcactgacagcaaaggaagaactgtagattttaagaatacgcttttg
attatgacctcgaacgttggaagcagcgtcattgagaagggtggcggtggcattggtttc
cagttggactacggtgaaaaggattcaagttacaaccgaatcaaaagccttgttaacgag
gaattgaagcaatacttcaggccagagttcttgaataggttggatgagattattgttttc
aggcagttgactaaacttgaagtgaaggaaattgccgacatcatgttgaaggaggtgttc
gagcgattgaagaagaaggaaattgaccttcaggttacggagcggttcagggaccgtgtg
gtcgatgagggttacagtcctagctatggagctagacctctgagacgagcaatcatgagg
ttactagaagatagtatggcagagcgtatgcttgcaggagaaattaaagaaggtgattca
gccattattgatgtggatagtgaaggaggcgtgactgtgttaaatggtacaacaggatca
tcttcaagtacagctatcgaggctcctgcaggcatcgcctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (21)   
   Pfam (21)   
All databases (36)   

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