KEGG   Physcomitrium patens (spreading earthmoss): 112280245
Entry
112280245         CDS       T01041                                 
Name
(RefSeq) TATA-binding protein-associated factor BTAF1-like
  KO
K15192  TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppp03021]
    112280245
Transcription machinery [BR:ppp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     112280245
SSDB
Motif
Pfam: DUF3535 SNF2-rel_dom Helicase_C HEAT HEAT_2 HEAT_EZ Vac14_Fab1_bd
Other DBs
NCBI-GeneID: 112280245
NCBI-ProteinID: XP_024371290
Position
3:7942187..7957312
AA seq 2140 aa
MAQQTSRLHRLLTLLDTGSTSTTRRTAARQIGEIAKQHRGELRPLLRRVRQFLRSKSWDT
RVASAQAIGAIAENVPHVTVKDLLAKAEAELGEKGHIESNLENLVFHESENGALTFQRFD
MQGVLENGAQLLSSGGQEYDVGVDNSKTPAERLARQKQNLRRRLGLDGCEQFMDVNDMIR
DEDLLGHRGAAHTNGEASARDFFVQPQPHKQEVHELVATMVPGGLSRTLSARERNMLKRK
AKVLPKDGAKEWGEEEEVEEPTAKRTKQTKSVMSEQAQGGDTKLVVDVVLDNENLEEDTV
GEWPFSHIVELLINDMFDPVWEVRHGSLMALREILSVQAASAGVTAPTLESESEAEAVEE
STPINSSVCDVNESEKEIPSSSPHKESMIDLNLDIPTEEDNGGLKKGEEDSSPAFHNHNW
TGMPEVVNSKPDWMKADQVPVKIELSLGCMKSGSKPDHLKSEDLNAMNSELNLEMGRTEG
SNASKPELDLELGMVKSELSLSAVKPELDLNMEVELDLNMEMKEEPLTVKDEPLTVKEEP
LTVKENPVNVKVETNSESDSQSNLSWHVLAPASVMKENNDPKVVRAAKKALAANIGFLQD
CTIRLLCVFALDRFGDYVSDQVVAPVRETCAQVMGAVMKQMPPPLVHETLSILLQMQNRP
EWEVRHGSLLGIKYLVAVRQEMLQELLPRVLPACMAGLEDADDDVRAVAAEALTPAAAAI
VASAGAKHVTAILLSLWDILLDLDDLSPSTSSVMHLLAELYSQPQVESKTVMEKPMLLDL
NETMMDEISGSDSATGVEDDPFLLSTLAPRLWPFMRHNITSVRLAAIRTLERLLESGDYR
AKGDTGSSWAVPILGDALRMVFQNLLLESDEAVIQCSQRVWRLLLQCPEEKLAEEATSYL
SSWLKLASTAAGAPLETSKMYSPNSLPRKSRGRAVAKLKAVRGEIPAVGESSWQPPRPNN
KVRDLLHVIVGADGEKSAVLMRVTTARALGILAASLPSALFPTVANLLTELLSSSLGTQR
QVASMVIVSWFKEMRVRMDHDKSSEAATAVQPMLVRLLELLGIGDPSSPTPGSSAPYGEL
SRMFAKMRTEAGALIKHTESLGTFKRSVLASLPSIDTISAEAAIELASKLVQPSQPHGDA
DDKSTSASDSMELARQRLLATAGYLQVVQGNLHMSVLASLAGAVVWMGELPVKLNPIIQP
LMAAIKREQEEALQQPAAEALAEIIVQCVGRKPSPNEKLIKNLCALTCADPVETPKATQA
NASAVSIEEAEVPSSGKGNKHAKVAPLSAIEERARAEGAITRRGAESALKSLCNKFGSSL
LNQLPKLWDCLTESFGQPALATSDQASIVLPVLTAEPQALITNLQVVRSMAPVVDKALHP
KMLLLLPAIFACVRHDHAAVRLVASRCLTATAQTMLEPVMASVLITAVPMLGDTTSVEAR
QGSGMLITALVEGLGTELVAYASLLIVPLLGCMSDSNHHVRQSVTKSFAALVPLLPLARG
VPPPKGLDEFQASRSADDTRFLEQLLDNSQVDDYKLQFPLNVTLRRYQQEGINWLAFLKR
FKLHGILCDDMGLGKTLQASAIVASDTVERANAFAVSKSPDVAPLPSLVVCPSTLVGHWA
FEIEKFIPTDILNPLQYAGSPQERIDLRSRFPKHNIIITSYDVLRKDIDYLATQVWNYCI
LDEGHIIKSAKSKITMAAKRVQADHRLLLSGTPIQNNVLELWSLFDFLMPGFLGTERQFQ
ANYGKPLQASREGKCSSKEAEAGVLAMEALHKQVMPFLLRRTKDEVLADLPPKIIQDRYC
DLSPLQLQLYEDFSHSQAKQEISSLVEHYGGPDASEARTASAPSTHVFQALQYLRKLCSH
PLLVLEDERQAARHVDAIAQSGAKDLHELHHAPKLQALRDILEECGIGVPAAAESSASPE
GGHHRVLIFAQLKNFLDIIEKDLFQTHMKGVTYLRLDGSVESDKRFDIVKAFNSDPTIDV
LLLTTHVGGLGLNLTAADTVVFMEHDWNPMRDLQAMDRAHRLGQKRVVNVHRLIMRGTLE
EKIMSLQRFKISVANTVINAENASLNTMDTTQLLDLFTVSKNAQKASTSMKAGEDESDAA
ASVGVNKGLKAMLNNLEELWDQSQYSEEYNLVQFVSRLNG
NT seq 6423 nt   +upstreamnt  +downstreamnt
atggctcagcagacatcccggctgcaccgccttcttacgcttcttgacacgggatccaca
tcaaccacaaggaggacagcagctcgacaaattggtgaaattgcaaagcagcaccgagga
gaacttcgaccacttcttagacgggtaaggcaatttttgcggagcaagagctgggataca
agggtggcatctgcgcaagccattggagctattgcagaaaatgtgccgcatgtaaccgtg
aaggatttgcttgcaaaagctgaagcagaattaggagagaagggccacattgagagcaat
ttagagaacctggttttccatgagagtgaaaatggtgctcttactttccagaggtttgac
atgcaaggagtgcttgaaaatggggcccagttgttatcatctggaggacaagaatatgac
gtgggagttgacaactccaaaacccctgctgaacggttggctcgtcagaaacagaatctg
cgtcgccgcttaggacttgatggatgcgagcagttcatggatgtcaatgatatgattcgt
gacgaagatctcttaggacatcgcggagcagctcacactaatggagaagcatcagctcga
gacttttttgttcaaccacaacctcataagcaggaggttcatgaactagtggctactatg
gtaccaggtggtctttcaagaactttaagcgctagagagcgtaacatgttgaaacggaaa
gccaaggtgttacctaaagatggtgcgaaagagtggggagaggaagaggaagttgaggag
ccgactgctaagcgtactaaacaaactaagtctgttatgtctgagcaggcacagggtgga
gatacgaagcttgtggtagatgttgtattagataatgagaatctagaggaagatactgtt
ggagaatggccctttagtcacattgtggagctcctcatcaacgatatgtttgatccagtc
tgggaggtacgacatgggagcttaatggcattgagagaaattctgagtgttcaagcagca
tccgctggtgtcacggccccaactctggagtctgaatcagaagctgaagcagtggaagaa
tcaacacccattaactcatcagtttgtgatgtcaacgaatctgagaaagaaattccatcc
tcaagtcctcacaaggaaagtatgatagatctaaatttagacataccaacagaggaagac
aatggaggattaaaaaagggtgaggaagattcatcaccagctttccacaatcacaattgg
actgggatgccagaagttgtaaacagcaagcctgactggatgaaagcagaccaggtccct
gttaaaatagaattaagtttgggttgcatgaaatcaggatcgaagccagatcacttgaaa
tctgaagacctaaatgcaatgaattctgagttaaatttggaaatgggtagaaccgaaggt
tcgaatgcgtcaaaacctgaactagatttggaattgggtatggtcaagtcggagctgtct
ttaagtgctgtgaaacctgaattggaccttaacatggaggtggagttagatcttaacatg
gaaatgaaagaagagccattgaccgtaaaagatgagccattaacagtaaaagaagagcca
ttgactgtgaaagaaaatccagtaaatgtgaaagtagagacaaactcagagagtgattcg
cagtcaaatctgtcctggcatgttcttgctcctgcaagtgtaatgaaagaaaacaacgac
ccaaaggttgtaagagccgcaaagaaagccctagctgcaaacatcggatttctacaagat
tgtactattcgtctactctgcgtctttgcccttgatcggtttggagattatgtgtcggat
caagtggtagcgcctgttcgggaaacatgtgcacaagtgatgggagctgtgatgaagcag
atgccaccacctctggttcatgaaacactgagcattttactccaaatgcagaatcgcccc
gagtgggaggtgcgacacgggagcctattgggtatcaagtatcttgtagctgttcgtcag
gaaatgctgcaggaactattacctcgagtccttccggcctgcatggcaggcttggaggac
gcagacgatgatgtacgggcagtggctgcagaggctttgactccagcagcagctgctata
gttgcatctgctggtgcaaaacatgtcactgctatcctgttgtccctttgggatatcttg
ctggacctggatgacctcagcccatcaactagtagtgttatgcacttgttagctgagctg
tattcccagccacaagtggagtcaaaaacagtgatggaaaagccaatgttgctagatttg
aatgagactatgatggatgaaatctcagggagcgatagtgcaaccggtgtagaagacgat
ccatttttgctttcgactttagccccacggctgtggcctttcatgcgccacaatatcacc
tctgtccgccttgcagctatacgaactctggagcggcttctggagtccggagattacaga
gcaaagggggacaccggaagttcctgggctgtccctatattgggtgatgctttgagaatg
gtcttccaaaatctgcttcttgagtcagatgaggctgttattcaatgctctcagcgtgtg
tggcgattgctacttcaatgtcctgaagaaaagcttgcagaagaagcaacttcatattta
tcatcgtggttaaaattggcaagcacagccgcgggtgctcctttggagacttctaaaatg
tattcaccgaattcactgcccaggaaaagcagaggaagagcagttgccaagctgaaggca
gttcgtggggagataccggcagttggggaatccagctggcaaccccctagaccaaacaac
aaggtccgggatcttcttcatgtgattgttggagctgacggcgaaaaatctgcagttctt
atgcgcgtgactacggctagagccctcggcatacttgcagcttcattaccttccgcactg
tttcctactgttgccaatttgctaactgagctgttatcctcgtccctaggcacgcaacgc
caggtagcatcaatggttattgtatcatggtttaaggaaatgagggtccgaatggaccac
gataagtcctcagaagcggcaacagctgtacaacccatgctggtccgactgctggagctt
ctgggtattggagacccttcatccccaacaccaggatccagtgcaccatacggagagctt
tccaggatgttcgctaaaatgcgcacggaggctggggctcttattaaacacacggaatcg
ttaggaacattcaagcgctctgttcttgccagcttaccgtcaattgacaccattagtgct
gaagcagcaatagagttggctagtaaacttgtgcaaccaagtcagccacatggggatgct
gatgataagtcaacgtctgcttcggattcaatggaattggctcgccaacgcttgctggct
acggctggatacctccaagtagtccagggtaatttgcacatgagtgtgttggcatcactt
gcgggtgctgttgtctggatgggtgaacttcccgtgaagcttaatcctattattcagcca
ttgatggctgcaataaaacgtgaacaggaagaagcacttcaacaacctgcagcagaggca
ttagcggaaattatcgtgcaatgcgtaggacgaaaacctagtccaaacgagaagttaatt
aagaacttgtgcgcattaacttgtgctgatccggtggagacaccaaaagccactcaagct
aatgcaagtgcagttagcatcgaagaagctgaagtgccctcttctgggaaaggtaataag
catgcaaaagtagcacctttgtctgccattgaagagagagcaagagccgaaggggcgatc
accagacgtggagcggaatcggcactgaagtctttatgtaacaagtttggtagttcatta
ttgaaccagcttccaaaattgtgggattgcttgactgaaagctttggacaaccagctctt
gccactagtgatcaagcttccattgtacttcctgttttaactgctgaacctcaggctctc
atcactaaccttcaggtggtgaggtccatggctccagtggttgacaaggctctgcatcct
aaaatgctgttacttttgccagcaatcttcgcctgtgtccggcatgaccatgcagcagtc
cgactcgtagcttccagatgcctgactgccacggctcagaccatgctcgagcctgtgatg
gcatctgtcttaattacagccgtgcctatgttgggtgacactacgtccgttgaagcacgg
caaggttcaggaatgctaattacggctctggttgagggtctaggcacggagcttgtggct
tacgcttccttgcttattgtccccttgctgggttgtatgagtgattccaatcaccatgtt
cgtcaaagtgtcacaaaaagttttgcagcccttgttcctcttcttccgttagctcgtgga
gtgcctcctcctaaagggcttgatgagttccaagcatcaaggagtgcagatgatacacgg
ttcctggagcagctattagataactcacaggttgatgattacaaattacaatttccactc
aatgtcactttgcgcaggtaccaacaggaaggcatcaattggcttgcatttttgaagcgt
ttcaaactgcacggcattttgtgtgatgatatgggtttgggtaaaaccctccaagcgtct
gccattgttgcatctgatactgttgaacgagcaaatgcctttgctgtatccaagagtccc
gatgtagcccctcttccatcgctggtggtatgtccatccactttggtaggacactgggct
ttcgagattgagaaattcataccaactgacattttaaatcccctacaatacgcggggtcg
cctcaagagcgaatcgatctacgatctcgatttccaaagcataacataattatcacatca
tatgatgttttgcgtaaagatatcgactatctggcaacgcaggtgtggaactactgcatt
ctcgatgagggtcacattatcaagagtgcgaagtcaaagatcacaatggctgctaaacgt
gtacaggctgatcatcggcttttactgtcaggaactcccatccaaaataacgttctggag
ctttggtctctatttgacttcctcatgcctggtttcctaggcactgagcgccagtttcaa
gctaattatgggaaaccattacaagcgtctagggaaggtaaatgctcttcaaaagaagct
gaggctggagtgttggccatggaagcacttcataagcaggtcatgccatttttgttgcgc
cgtacgaaagacgaagtgctcgctgatcttccaccaaaaattattcaagatcgatactgt
gatctcagcccattgcagttacagctgtatgaagatttttctcattcccaggcaaaacaa
gaaatctcttcattagtagagcattacggtggtcctgatgcttcagaagcccgaacagcc
agcgctccttccactcatgttttccaggcactgcaatacctgcggaagctttgtagtcat
cctctgcttgtattggaggacgagagacaagcagcgcggcatgttgatgcaattgctcaa
agtggcgccaaagacctacatgaactacatcatgcgcccaaacttcaggctcttcgggat
atcttagaagaatgcggtattggggtacctgcggcagctgaaagttctgccagtccagaa
ggaggtcatcatcgtgttcttatctttgcccaacttaagaactttttggacatcatagaa
aaggaccttttccaaacacacatgaaaggggtgacatacttgcgattggatggatcggtg
gagtcagacaaacgtttcgatattgtcaaagccttcaattccgatcccaccattgatgtg
ctacttctcaccactcatgttggaggtctaggactgaatttaactgcagcggacacagtc
gtattcatggagcatgactggaaccccatgcgcgacctgcaggcaatggatcgagcacat
aggttaggacaaaagcgagtagtcaatgtccacagactcattatgcgtggaacacttgaa
gagaagatcatgagcctccagcgcttcaaaatctcagtagcgaacactgtcataaatgca
gagaatgctagtctaaatacaatggatactacacagcttctcgacctttttacagtttct
aaaaacgctcaaaaggctagcacatccatgaaggccggagaggacgaaagtgatgctgca
gcatcagtaggagttaacaagggcctcaaagccatgcttaacaatttagaagagttgtgg
gaccagtcacagtatagtgaagagtacaatttagtccaatttgtttctcgcctcaatggt
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system