KEGG   Physcomitrium patens (spreading earthmoss): 112281465
Entry
112281465         CDS       T01041                                 
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112281465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112281465
   03110 Chaperones and folding catalysts [BR:ppp03110]
    112281465
   03029 Mitochondrial biogenesis [BR:ppp03029]
    112281465
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppp04147]
    112281465
Enzymes [BR:ppp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     112281465
Messenger RNA biogenesis [BR:ppp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     112281465
Chaperones and folding catalysts [BR:ppp03110]
 Heat shock proteins
  HSP60 / Chaperonin
   112281465
Mitochondrial biogenesis [BR:ppp03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    112281465
Exosome [BR:ppp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112281465
  Exosomal proteins of other body fluids (saliva and urine)
   112281465
  Exosomal proteins of breast cancer cells
   112281465
  Exosomal proteins of colorectal cancer cells
   112281465
  Exosomal proteins of bladder cancer cells
   112281465
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 112281465
NCBI-ProteinID: XP_024373783
Position
4:complement(15168553..15175653)
AA seq 578 aa
MYRAAAALASRVNRGRSLVQNFSKLQSTRHFSAKDIRFGVEARALMLQGVEQLADAVQVT
MGPKGRTVIIEQSFGSPKVTKDGVTVAKAIEFKDRLQNVGASLVKSVASSTNDVAGDGTT
CATVLTRAIFVEGCKSVAAGMNAMDLRRGISVAVDAVVSYLKSQAKMISTSEEIAQVGTI
SANGDREIGDLLARAMEKVGKEGVITVSDGKTLFNELEVVEGMKLDRGYISPYFITNSKT
QKVEFENPVILIHEKKINSLQAILPVLELVVKDQRPLLIVAEDVESEALATLIVNKLRGG
VKVCAIKAPGFGENRKSLMQDLAVLTGGQLITEDMGLKLENITPDMLGHCKKVTVSKDDT
IILDGGGNKAILEDRTEQIREAISTATSDYDKEKLQERLAKLSGGVAVLKIGGASEVEVS
EKKDRVTDALNATKAAVEEGIVPGGGVALLYASRELDNVQTSNFDQKVGVQIIQNALKMP
AYTIARNAGVEGAVVVGKLLEEANLNIGYDAAKAEYVDMVKAGIIDPVKVIRTALVDAAS
VASLLTTTEAIVADFPKDDEAMPGMGGMGGMGGMGGMY
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgtatcgcgcggcggcagctttggcgtcccgagttaacagggggcgctcacttgtacaa
aatttcagtaagttgcaatcaactcgacatttttctgcaaaggatatcaggtttggggtt
gaggcccgtgcccttatgctccaaggcgtggagcaacttgcagatgcggtacaagtgacc
atgggccccaagggccggactgttattattgagcaatcatttggctctccgaaagtcacc
aaggatggtgttactgtggccaaagccatagagttcaaggacaggctgcagaacgtggga
gcatcactcgtgaagtcagtcgctagttctacaaatgacgttgctggagatggaacaact
tgtgcaacagtgctcacccgagcaatttttgttgagggctgcaaatcagttgcagctggc
atgaacgcaatggacctacgtagaggtattagtgttgctgttgatgccgttgtgtcctat
ctcaagagccaggctaagatgattagcacatcggaagaaattgctcaggttggaacaatc
tctgcgaatggagaccgagaaattggtgacttgctagctcgtgctatggagaaggttggc
aaggagggtgtcatcactgtctctgacggaaaaactctgtttaatgagttggaggttgtg
gagggtatgaagctcgacagaggatatatctctccctatttcatcaccaattctaagact
caaaaagtggaattcgaaaatccagttatcttgatccacgagaagaagatcaacagtctt
caagcgatcctcccagtgcttgaacttgttgtcaaggatcaaaggcctctcctgattgtt
gctgaagatgtggaaagtgaagctttggctacgctgatagtcaataagcttaggggtggt
gtgaaggtttgtgccatcaaggcccctggttttggtgagaacaggaaatcattaatgcaa
gaccttgccgtgttaactggtggtcagctcattactgaagacatgggattaaaactcgag
aatatcacaccagatatgctgggacactgcaaaaaggtcaccgtatcgaaggatgacacc
attatcttggatggcggaggtaacaaagctattctcgaagatcgtactgaacagatccga
gaggccatcagcactgccacttccgattacgacaaggagaaattgcaggagaggttggcc
aaattgtcaggaggtgtagctgtacttaagattggaggagctagtgaagttgaggttagt
gagaagaaagaccgtgttactgatgcattgaatgccaccaaagccgctgttgaggagggc
attgttcctggtggtggtgttgctcttttgtatgcttcacgggagcttgacaatgttcaa
acttcaaacttcgaccagaaggttggagtgcaaattattcagaatgccttaaagatgcct
gcgtacacaattgcacgcaatgctggagtcgagggagctgtggtggttggaaagcttttg
gaggaagccaacttgaacattggatatgatgctgccaaagctgagtacgtcgacatggtg
aaggcaggaataattgatcctgtaaaggtcatcagaacagcgcttgttgatgctgctagt
gtcgcatcgcttcttacaacaactgaagcaatagttgccgatttccccaaggacgacgag
gcaatgcctggtatgggaggaatgggaggcatgggaggcatgggggggatgtactag

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system