KEGG T01041: 112282376

Physcomitrium patens (spreading earthmoss): 112282376

Entry

112282376         CDS       T01041

Name

(RefSeq) chaperone protein ClpC1, chloroplastic-like

K03696

ATP-dependent Clp protease ATP-binding subunit ClpC

Organism

ppp Physcomitrium patens (spreading earthmoss)

Brite

KEGG Orthology (KO) [BR:ppp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ppp03110]
    112282376
Chaperones and folding catalysts [BR:ppp03110]
Heat shock proteins
  HSP100
   112282376

SSDB

Motif

Pfam:

AAA_2 Clp_N AAA_lid_9 ClpB_D2-small AAA AAA_5 AAA_16 AAA_22 Sigma54_activat UVR TniB nSTAND3 AAA_18 NACHT AAA_28 Zeta_toxin AAA_14 IstB_IS21 AAA_25 DNA_pol3_delta2 AAA_23

Other DBs

NCBI-GeneID:

112282376

NCBI-ProteinID:

XP_024375668

Position

5:complement(16102941..16107441)

AA seq 936 aa
MTSMAHSLTIPSVGASPVGQFNGSRKSKKQGAARAASMGRRNVDKSASMSVARFQSFSGM
RKGSVVDALVVKQGKDFKSVVANSTAVTGHSRPSRGVTTAMFERFTEKAIKVIMLAQEEA
RRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIR
MVGENTEAVGVGGGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRVAQIERVTQILGR
RTKNNPCLIGEPGVGKTAVAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFE
ERLKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLD
EYRKHIEKDPALERRFQPVLVPEPTVEETIDILKGLRERYEIHHKLRYTDEALVAAAQLS
YQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEEARELDKQLRAVTKEKNEAVRGQDFEK
AGELRDKEMELKAQISAFIEKGKEQMKAESETGDVGPTVEESDIQQIVAAWTGIPMEKVS
SDESDRLLKMEDTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS
ELAKALASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPYT
VVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGGGI
GFQLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKLEVKEIADIMLKE
VFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEIKEG
DSAIIDVDGDGNVTVLNGTTGTSTNTAVDQAPAGIA

NT seq 2811 nt +upstreamnt +downstreamnt
atgacgtcgatggcgcactctctgacgataccctcggtgggagcctcgcctgttggccag
tttaatggcagtaggaaaagtaagaaacagggtgctgcgcgggcggcgtccatggggaga
cggaatgtggataagtctgcaagcatgtctgtggctaggtttcaatcgttttctggaatg
cgcaagggttctgttgtggatgccttggttgtgaagcaagggaaggatttcaaatctgtg
gtggcgaactctaccgctgtgactggccattctcgcccatccagaggtgtcacgactgcc
atgtttgagcgtttcactgagaaggctatcaaggttatcatgttggcgcaggaagaagct
aggcggcttgggcataattttgttggcactgagcaaattctgttggggctcatcggtgag
ggcactggtattgcggccaaagtgttgaaatccatgggagtgaacctcaaggaagctcgt
gtggaggttgagaagatcatcggtcgtggaagtggttttgttgctgtcgagatccctttc
acgcccagggccaagcgagtcctcgagctgtcattggaggaagcccggcagcttggtcac
aattacatcggtacggagcatcttcttttggggttgctgcgagagggcgagggtgtagct
gctcgagttctagagaatctcggggctgatcctagcaacattcgtactcaagtcattcgc
atggttggtgagaacactgaagctgttggtgtgggaggtggtagcggcagcagtggcaac
aagatgcccaccttagaagaatatggaacaaatttgactaaacttgctgaagagggaaag
ctcgacccagtcgtaggaagagttgcacaaatcgagcgagtgactcagatccttggacgt
agaactaagaacaacccatgtctgatcggagaacctggtgttgggaaaactgctgttgcc
gaggggttggctcagagaattgcatccggggatgtgccggaaactatcgaaggcaagaag
gttattactctcgacatgggattgttggttgctggaaccaagtacagaggagaattcgag
gagaggctaaagaagttgatggaggagatcaaacaagcagatgatattatccttgttatt
gatgaggttcacacgctcattggtgctggtgcagccgagggtgctatcgacgctgcgaac
atcttgaagcctgctctcgcccgtggtgaattgcagtgcattggagcaaccactctggat
gagtacaggaagcatattgagaaggatcctgcattggagcgtcgcttccagcccgtgctg
gttccagagcctaccgttgaggaaaccatcgatattcttaagggattgagagagagatat
gagatccatcacaaattgcgatacacagacgaggccctggttgcagcagcgcagctttcc
tatcaatacatcagcgatcgtttcttgcctgacaaggcaattgacttaattgacgaggcg
ggttctaaagtgaggctgaaacacgctcagctacccgaagaggcaagggagcttgataag
caactgcgtgctgttaccaaagagaaaaatgaagctgttcgtgggcaagatttcgagaag
gctggagagttgagggacaaggagatggagttgaaggcccaaatttcggccttcattgag
aagggtaaggagcaaatgaaggcagaaagtgaaactggcgacgttggtccaaccgtagaa
gagtctgatatccagcagatagtggctgcctggactggtattcccatggagaaggtttcg
agtgacgagtctgaccgtcttttgaagatggaagatactctccacacccgagtcattggt
caggacgaagctgtgaaggccatcagtcgtgctatccgtagggcacgtgttggactgaag
aatcccaaccgccctattgcgagtttcattttctctggtcctactggggttggaaagtca
gagcttgctaaagctcttgcttcgtactacttcggttctgaggaagctatggttaggctc
gacatgtccgagtttatggagaggcacaccgtatccaagcttatcggttctccacccggt
tacgttggttatagtgaaggaggccagttgaccgaagctgtgcgcaggaggccttacact
gtggttctttttgatgagattgagaaagctcatcctgacgttttcaacatgatgcttcag
attttagaagatgggcgcttgaccgacagcaagggtcgaactgtagattttaagaatact
ctcctcatcatgacttcaaatgtaggaagcagtgtcattgagaaaggaggaggcggcatt
ggtttccagttggattacggtgagaaggattcaagttacaaccgcatcaagagccttgtt
aatgaggagttaaagcaatatttcaggcccgagtttttgaatagacttgatgagattatt
gtcttcaggcaactcaccaagttggaagtgaaggaaattgctgatatcatgttgaaggag
gtcttcgagcgcctgaagaagaaggaaattgacttacaggtcactgagagatttagggat
cgtgttgttgacgaaggctacagtcctagctatggtgctcggccattgaggcgagcgatt
atgaggcttctggaagatagcatggctgagcgcatgctttctggagaaattaaggaggga
gactctgctattattgatgtggatggtgatggtaatgtcacggttttgaatggtaccaca
ggtacttccacaaacacagctgtagaccaggcccctgccggtattgcctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (30)   

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