KEGG   Physcomitrium patens (spreading earthmoss): 112285822
Entry
112285822         CDS       T01041                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like isoform X1
  KO
K15685  E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112285822
   04131 Membrane trafficking [BR:ppp04131]
    112285822
   04121 Ubiquitin system [BR:ppp04121]
    112285822
Enzymes [BR:ppp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112285822
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    N6-methyltransferase complex
     112285822
Membrane trafficking [BR:ppp04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    112285822
Ubiquitin system [BR:ppp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112285822
SSDB
Other DBs
NCBI-GeneID: 112285822
NCBI-ProteinID: XP_024382821
Position
8:complement(11842183..11846060)
AA seq 513 aa
MVNLTIRLSKAGGNSGLKAEQNLLEANEASLPSKLIGADLPHANGLGFSWSDICTVNIVG
FKAQRKSGEKVHICLRCNFPIAVYGRMEQCHHVLCLACAENDSTCFLYALHPWCKGKVAR
IQKVDVSVGIYICGVPGCLRSFVLRPDFEWHIANDHSQPSQPESTKITPNQLQIPPEDAS
QSQSDLVIRRRNSSTSLQVIILKKEDSQRLSKISHQNPQVPPIRSIQSRDEHIGLSYSIT
GNVDSRQQQEHISWDSTQQGQKLRDIYKVEAHEGQSQRDRRSDTGPYHCLRKRERGRGPR
GGHQPSSLSSSKDLPKQRERVLQAQHCQQPSTLPLPPLYPPPNHLQKIPTFRESGGCSLR
LESHREFCSSLAMPPPGPPPGGWPVNLIPQDGYGTNGCPRRPPDSFGHIRPMGGMLQDRY
GPQIGSPRPHFLPEFGHPRTIKPPISIPRFHEGHLPPPPPPPPRHLPQRAALIGTRPNLG
ESITDYGWGPGHPGNFGVPRPGQGFPGWLPPAN
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggtgaatttaacgatacgactcagcaaggcagggggcaattcagggttgaaagcagag
caaaatttattggaggccaatgaggcgtctcttccctcgaagctaattggtgcggatttg
cctcatgcaaatggattaggattttcgtggtccgacatttgcacagtgaatatagtagga
ttcaaagcgcaacgcaaatctggggagaaggtccacatctgcttgaggtgcaattttccg
attgctgtctatggccgcatggaacaatgccatcacgtgttgtgccttgcttgtgccgaa
aatgattctacatgtttcttgtacgctcttcacccctggtgcaaaggaaaagtggcacga
attcagaaagtagatgtaagtgtcggcatatacatctgcggtgtccctggctgtctgcgg
tcttttgtattgcggcccgattttgagtggcacatcgccaatgaccactcacaaccttct
caacccgaatcaacaaaaatcactcctaatcagctccagatcccacctgaagacgctagt
caatctcaatcagatctcgtaattcgaagacggaactcctccaccagtttgcaagtgatc
atcctcaaaaaagaagattcacaacggctatctaaaatttctcatcagaatccgcaagtt
cctcctatacggtccattcaaagcagggacgaacatattggcctttcatattctattaca
gggaatgtagattcgagacagcaacaagaacatataagctgggattcaactcaacaagga
cagaaattgagagacatatataaagtggaggcacatgaagggcagagccagagggacagg
agaagtgacacaggcccttatcactgtttaaggaaaagagaacgtggtcgagggccacga
ggtggacatcaaccgtcgtctctgtcatcttcgaaagacctgccaaagcaaagagaacgt
gtactgcaagctcaacattgccaacagccttcaactctgccacttcccccgctctaccct
ccacccaatcatcttcaaaaaattcccactttccgtgaatctggaggttgttctctccgg
cttgaatctcacagagaattttgctcgagcctagcaatgcctcctccaggaccaccgcca
ggaggatggcctgtgaatctcatcccgcaagacggatatggcacgaatggatgtccccgg
aggccccctgatagcttcggacatatacggccaatgggtggaatgctacaagatagatat
gggccacaaatcggttcccctaggccacattttttacctgaatttggccaccctaggacc
attaaacctcccatcagcatacccaggtttcatgaagggcatcttcctcctccaccacca
ccaccaccaaggcaccttcctcagcgggctgctttaatcggtacccggccaaatttgggg
gagtcaattacagactacggttgggggcctggacatccaggcaactttggtgttcctcgt
ccaggacaaggtttccctggatggttgcctcctgcaaattga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
All databases (15)   

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