KEGG   Physcomitrium patens (spreading earthmoss): 112288918
Entry
112288918         CDS       T01041                                 
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic-like
  KO
K06444  lycopene epsilon-cyclase [EC:5.5.1.18]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp00906  Carotenoid biosynthesis
ppp01100  Metabolic pathways
ppp01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    112288918
Enzymes [BR:ppp01000]
 5. Isomerases
  5.5  Intramolecular lyases
   5.5.1  Intramolecular lyases (only sub-subclass identified to date)
    5.5.1.18  lycopene epsilon-cyclase
     112288918
SSDB
Motif
Pfam: Lycopene_cycl DAO Pyr_redox_2 HI0933_like FAD_binding_2 FAD_oxidored GIDA Pyr_redox_3 NAD_binding_8 FAD_binding_3
Other DBs
NCBI-GeneID: 112288918
NCBI-ProteinID: XP_024389432
Position
11:9667123..9671905
AA seq 589 aa
MNARLAHDPHFSRLHVMGAAVAGALPHLHCAAAGSTSTSSSSFFVPDIVRSSSAAFASCA
ARPGRHWPLRRGNDVTASRSLSWTVPAGRVGKQCAKCPTVCFAASVPTQIHDVVSEDEED
YIKAGGEELDLVQLQASKSCEQPKIAEKLQPLGSETLDLVVVGCGPAGMCLAAEAAKQGL
NVGLVGPDLPFVNNYGVWTDEFAALDLEDCIEQTWRDSAMYIEEHSPIMIGRAYGRVSRT
LLREELSRRCAEAGVRYLDSKVDRILEVNEDLNTVVCTSGRTVNSRLVTVASGAAAGRFL
KYETGGPGVGVQTAYGIEVEVEHYPYNPDFMLFMDYRDYRSRDKGDISPEEIPTFLYAMP
ISSTRVFFEETCLAARPAMPFSLLRERLQERLEKMGIKVSHVHEEEWSYIPVGGSLPVTT
QRQLGFGAAASMVHPATGYSLVRSLSEAPFYAAAIARALKSTGGKLGTSNSQEAAIEAWN
VLWSGERKRQRAFFLFGLELILQLDTVGIKDFFVTFFRLPEWLWKGFLGSKLSSVDLIWF
ALATFVIAPNALRFQLVKHLIVHPSGAKLVQTYVGLVDAGTHSTKLTRV
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaacgcgaggcttgcccatgacccgcacttttcccgtctgcacgtgatgggagctgca
gttgcaggcgctctaccgcatcttcattgcgctgctgctggttctacttctacttcttct
tcgtcgttttttgtacctgatattgtgaggagttcctctgcggcttttgcttcctgtgct
gcgcggcccggtcgccattggccgctgcgtagaggaaatgatgtaactgcgagtcgtagc
ctcagctggacggttccggcggggcgagtcgggaagcaatgtgcgaagtgtccgacagtg
tgcttcgctgcttctgttcctactcaaattcacgatgtagtgtctgaggatgaggaggat
tacatcaaggctggcggagaagagctggacctcgtgcagctgcaggcctccaagtcttgt
gagcagccgaagattgccgagaagctacaacctttggggagcgagacattggatttggtg
gttgtaggctgcggacctgcgggaatgtgcctcgcggctgaggctgccaaacaaggcctg
aatgtaggtcttgttggtcctgacctgcccttcgtcaacaactatggtgtctggactgat
gaatttgcggcgttggatctcgaggactgcatagagcaaacttggagagactcagccatg
tatattgaagagcactcgccaattatgatagggcgtgcatatggtcgcgtaagtcggact
cttctgagagaagagctctcgagaaggtgcgctgaggcaggagtaagatacttagattct
aaagttgaccggatacttgaagtcaacgaagatttgaatacagtcgtgtgcaccagtggg
agaactgtcaacagcagacttgttacagtcgcgtctggagcagctgctggcaggttcttg
aaatatgaaacaggaggtccaggagtcggtgtgcaaactgcttacggaattgaagtggag
gttgaacattatccttacaatcctgattttatgctcttcatggactatcgagactataga
agtcgagacaaaggagatatcagccctgaagagatacccacctttttgtacgcaatgcct
atttcatcaactcgtgttttcttcgaggaaacatgtcttgctgcaagaccagccatgccc
tttagtctccttagggaaaggctacaagagcgtttggagaagatgggcattaaggtttca
catgttcacgaagaggagtggtcatatatcccagtgggaggcagcctaccagtgacaact
caaagacagctgggttttggagcagctgccagtatggttcacccggccactggctattca
ctagtccgctccctatctgaagctccattttatgcggcagccattgctagggcacttaaa
tccacaggcggcaagcttggcacatctaattctcaggaagctgctatagaagcatggaat
gtcttgtggtctggcgaaagaaagagacagcgagccttttttctgtttggattagagctt
attttgcaacttgatactgttggaatcaaagattttttcgtgaccttttttcggcttcct
gaatggttgtggaaaggttttcttggctcaaagctttcatccgtggatcttatctggttt
gcacttgcaacttttgtgattgctccaaatgcgttgcgattccagcttgtgaagcacttg
atagtacaccccagtggagcgaagttagtgcagacgtatgtgggtcttgtagatgctggc
actcattccactaaattgacgcgcgtgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (31)   

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