KEGG   Physcomitrium patens (spreading earthmoss): 112289775
Entry
112289775         CDS       T01041                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 1-like
  KO
K12194  charged multivesicular body protein 4A/B
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03250  Viral life cycle - HIV-1
ppp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112289775
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112289775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppp04131]
    112289775
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppp04147]
    112289775
Membrane trafficking [BR:ppp04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    112289775
Exosome [BR:ppp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112289775
  Exosomal proteins of other body fluids (saliva and urine)
   112289775
  Exosomal proteins of colorectal cancer cells
   112289775
SSDB
Motif
Pfam: Snf7 DUF6437 TraF_2
Other DBs
NCBI-GeneID: 112289775
NCBI-ProteinID: XP_024391108
Position
12:15197962..15200391
AA seq 216 aa
MFGRLFGKPKEEPSTLSTLDKLNETLEMLEKKEKVLQKKIAMEIEKAKEFTSLKNKRAAI
QCLKRKKLYEVQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAIQKATNID
DVDKTMDEINEQTENMKQIQEALSTPIGTSADIDEDELEAELEDLEGAELEEQLITPSVQ
ELPQAYRPPVPTQKAKPPQNKEEEDELAALQAEMAL
NT seq 651 nt   +upstreamnt  +downstreamnt
atgtttggcagattgttcgggaagcccaaagaggagccctctaccctctccacgcttgat
aagctcaatgagaccctggagatgttggagaaaaaggagaaagtgttgcaaaagaaaata
gctatggaaattgagaaggctaaggagtttacgagcttgaagaataagcgagctgcgatt
cagtgtttgaagcggaagaagttgtatgaagtccaagtagagcaactcggtaactttcaa
ttgcgtattcatgaccagatgattatgttagagggtgctaaagcaaccacagaaactgtg
gatgccctgcgtagcggtgcttcagctatgaaggctatccagaaggcgacaaatattgac
gacgttgacaagaccatggatgagatcaatgagcaaactgagaacatgaaacagatccag
gaggcactctcaactcctattgggacatcagctgatatcgacgaggatgagttagaagcc
gagctcgaggatcttgaaggagctgaattagaagaacaattaatcactccctctgtccag
gaactcccacaagcataccgacctccagttcctactcagaaagccaaaccacctcagaac
aaggaggaagaagatgaacttgcagcccttcaagctgaaatggcgctctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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