KEGG   Physcomitrium patens (spreading earthmoss): 112290284
Entry
112290284         CDS       T01041                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp04145  Phagosome
ppp04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112290284
  09142 Cell motility
   04814 Motor proteins
    112290284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112290284
   03036 Chromosome and associated proteins [BR:ppp03036]
    112290284
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ppp04812]
    112290284
   04147 Exosome [BR:ppp04147]
    112290284
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112290284
Chromosome and associated proteins [BR:ppp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112290284
Cytoskeleton proteins [BR:ppp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112290284
Exosome [BR:ppp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112290284
  Exosomal proteins of other body fluids (saliva and urine)
   112290284
  Exosomal proteins of colorectal cancer cells
   112290284
SSDB
Motif
Pfam: Tubulin Tubulin_C
Other DBs
NCBI-GeneID: 112290284
NCBI-ProteinID: XP_024392181
Position
13:8301741..8304337
AA seq 451 aa
MRECLSIHVGQAGIQIGNACWELFCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRCVMLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLALD
RIRKLADMCTGLQGFMVYHAVGGGTGSGLGSLLLERLSVDYGKKSKLSMCVFPSPQVSGA
VVEPYNSILSCHGLLEHTEVSVMYDNEAIYDICRRNLDIERPTYTNLNRLITQVMSSLTA
SLRFDGALNMDLTNFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVSELTNSVFEPSS
MMAKCDPRHGKYIACAMMYRGDVVPKDVNSSVGTIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMIANSTAIAEVFARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDFEEVGADSTEGDGEDEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagagaatgcctttcaatccatgttggtcaggccggcattcagatcggcaacgcgtgc
tgggagcttttttgtcttgagcatggtatccagccggatgggcaaatgccgagtgacaag
acagtgggaggaggagacgatgccttcaacacattcttcagcgaaacaggagcgggaaag
catgtgcccagatgtgtgatgctggacttggagcccactgtgattgacgaagttcgcaca
ggcacgtaccgccagctcttccaccccgagcagctcattagcggaaaggaagacgccgcc
aacaactttgctcgtggacactatacaattggcaaggagattgtggatttggcactggac
aggatccgaaagctggcagacatgtgcactggtctgcagggattcatggtgtaccacgca
gtcggtggcggcacaggctcaggcctcgggtcattgcttttggagaggctgtctgtggac
tatggcaaaaagtccaagctttccatgtgcgtcttcccgagtccgcaagtgtcaggcgcc
gtagtggagccctacaacagcattttatcatgtcatggcctcttggagcacacggaagta
tccgtgatgtacgacaacgaggccatctacgatatatgccggcggaacctggacattgag
cgacccacttacaccaacctgaacaggctcatcacgcaggtgatgtcgtcattgaccgcc
tcgttgcgattcgacggagccctgaacatggatctcaccaacttccagaccaacctcgtc
ccgtatccaaggatccatttcatgctctcgtcttacgcgccggtcatctcggccgagaaa
gcctaccacgagcagctatccgtgtcggagctcaccaacagcgtgtttgagccctccagc
atgatggccaaatgcgatcccaggcacggcaagtacatcgcctgcgcgatgatgtaccga
ggggacgtggtgccaaaagatgtgaactcgtccgtgggcaccatcaaaaccaagaggacc
atccaattcgtggattggtgtcccaccgggttcaaggtggggatcaactaccaaccgccg
acagtcgtgcccggtggcgatctagcgaaagtgcagcgcgcggtttgcatgatcgccaat
agcaccgccatcgctgaggtattcgctcgattagaccacaaattcgacttgatgtatgca
aagcgcgcgttcgtgcactggtatgtcggtgagggcatggaagagggggaattctccgag
gctcgtgaggatttggcggcgttggagaaggattttgaggaggtgggtgccgattcaacc
gagggtgatggagaggacgaaggagaagagtattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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