KEGG T01041: 112293422

Physcomitrium patens (spreading earthmoss): 112293422

Entry

112293422         CDS       T01041

Name

(RefSeq) chaperone protein ClpC1, chloroplastic-like

K03696

ATP-dependent Clp protease ATP-binding subunit ClpC

Organism

ppp Physcomitrium patens (spreading earthmoss)

Brite

KEGG Orthology (KO) [BR:ppp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ppp03110]
    112293422
Chaperones and folding catalysts [BR:ppp03110]
Heat shock proteins
  HSP100
   112293422

SSDB

Motif

Pfam:

AAA_2 Clp_N AAA_lid_9 ClpB_D2-small AAA AAA_5 AAA_22 AAA_16 Sigma54_activat UVR TniB nSTAND3 AAA_18 NACHT AAA_14 Zeta_toxin IstB_IS21 AAA_25 Torsin

Other DBs

NCBI-GeneID:

112293422

NCBI-ProteinID:

XP_024398567

Position

16:10845469..10850444

AA seq 937 aa
MASMAHSLTLPSAGAELTIGQLKCGAKSRRRAAARAAVGRLNVQAKSASLSLTPFQSFSG
MRKASVIDSLTVKQGRDFKSVVSNSVAICNESRPSKAVTTAMFERFTEKAIKVIMLAQEE
ARRLGHNFVGTEQILLGLIGEGTGIAAKVMKSMGVNLKEARVEVEKIIGRGSGFVAVEIP
FTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLLREGEGVAARVLENLGADPSNIRTQVI
RMVGENTEAVGVGAGSGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRVAQIERVTQILG
RRTKNNPCLIGEPGVGKTAVAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEF
EERLKKLMEEIKQADDIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL
DEYRKHIEKDPALERRFQPVLVPEPTVEETIEILRGLRERYEIHHKLRYTDEALIAAAQL
SYQYISDRFLPDKAIDLIDEAGSKVRLKHAQLPEEAKELDKELRAVTKEKNEAVRGQDFE
KAGELRDREMELKAQISAFIEKDKEQMKAESETGDVGPTVEESDIQQIVSAWTGIPVEKV
SSDESDRLLKMEDTLHNRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK
SELAKSLASYYFGSEEAMVRLDMSEFMERHTVSKLIGSPPGYVGYSEGGQLTEAVRRRPY
TVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGGG
IGFQLDYGEKDSSYNRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLTKLEVKEIADIMLK
EVFERLKKKEIDLQVTERFRDRVVDEGYSPSYGARPLRRAIMRLLEDSMAERMLSGEIKE
GDSAIIDVDGDGNVTVLNGTTGTASKTDTDMAPAGIA

NT seq 2814 nt +upstreamnt +downstreamnt
atggcgtcgatggcgcattccttgactcttccgtctgcgggggcggagcttaccattggc
cagctcaagtgcggtgcgaagagtaggagaagagcggctgcaagagccgcagtgggtagg
ctgaatgtgcaagcgaagtctgctagtttgtcattgactccgtttcagtcattttcgggg
atgcgaaaggcctcggtgattgattccctgaccgtgaaacaagggagggattttaaatct
gttgtgtcgaactccgttgcaatttgtaacgaatcgcggccttcgaaggctgtgactacg
gccatgttcgagcgtttcactgagaaagctattaaggttatcatgttggctcaggaggaa
gcaaggcgtctcgggcacaatttcgttggtactgaacaaattttgcttggccttattggt
gagggtactggtattgctgcgaaagtgatgaagtccatgggagtgaaccttaaggaagct
cgcgtggaagtagagaagattattgggcgcgggagcgggttcgtggctgttgagattccc
ttcacgcccagggccaagagagttctcgagctctcactcgaagaagctagacagcttggt
cacaactatattggcacagagcatttgctgctggggctgctacgagagggagagggtgtt
gctgcccgagtgcttgagaaccttggcgctgaccccagcaacattcgaactcaggtgatt
cgaatggtaggcgaaaataccgaggctgttggtgtcggagctggcagcggcagcagtggt
aacaagatgcccactctggaggaatacggaacgaatttaaccaaactcgcggaagaggga
aagctagacccagttgttggaagagttgcacagatagagcgagtgactcaaatccttggt
cgcagaaccaaaaacaacccgtgcctaattggagagcctggagttggaaaaactgctgtt
gccgaaggtttggcgcagagaattgcgtctggggacgtaccggagaccattgaaggaaag
aaggttatcaccctcgacatggggctgctggttgccggaaccaagtacagaggagaattt
gaggaaagactgaagaaactgatggaagaaattaaacaagcggacgatatcatccttgtt
attgatgaagtgcacaccctcattggtgctggtgccgccgagggtgctattgacgctgcc
aacatcttgaagccagctttagctcgcggtgaattacagtgcatcggagcaaccacactt
gacgagtacaggaagcacattgagaaggatcctgcattggaacgtcggttccaacctgtg
ttagttccagagcctactgtagaggaaactattgaaattctcagaggattgagagaaaga
tacgagatccaccataaattgcgttacactgacgaggctttgattgcagcagcccagcta
tcttaccagtacatcagtgatcggtttttgcctgacaaggctattgatttgattgatgag
gcgggttcgaaagtaaggctgaaacacgctcagctacccgaagaggcgaaggagcttgac
aaggagttgcgtgccgttacgaaggagaagaatgaagctgtgcgtgggcaggattttgag
aaggccggagaactaagggatcgcgagatggagctgaaggctcaaatatcggccttcatt
gagaaggacaaagagcagatgaaggcagagagtgaaaccggtgatgttggtcctactgtc
gaagaatctgacattcagcagattgtgtctgcctggacaggcattcccgttgagaaggtc
tcaagtgatgaatctgaccgcttgttgaagatggaggatacacttcataatcgggttatt
ggccaggatgaagcagtgaaggccatcagtcgtgctattcgcagagctcgtgttggactt
aagaaccccaatcgtcccatcgctagtttcatcttttctggtcctactggtgtcggtaaa
tcggagcttgctaaaagtctcgcttcctactactttggttctgaagaagccatggttaga
cttgatatgtctgaatttatggagagacacactgtctccaaactcattggatctccacca
ggttatgtgggttacagtgaaggaggacagctaacagaggctgtgcgcagaagaccatac
actgtggttctttttgatgagattgagaaggcacatcctgatgttttcaatatgatgctt
cagattttggaagacggaagattaaccgacagcaaagggcggactgtagatttcaagaat
actcttctaattatgacttcaaacgtaggaagcagtgtaattgagaaaggtgggggtggt
attggtttccaattggactacggcgaaaaggattctagctacaatcgcatcaagagcctc
gttaatgaggagctgaagcagtactttaggcccgagtttttgaaccgattggatgaaatc
attgttttcagacaactgactaaattggaagttaaggagatcgctgatattatgttgaag
gaggtcttcgagcggttgaagaagaaggaaattgatttacaggtaactgagagattcagg
gatcgtgttgttgacgaaggctatagtcctagctatggagctcggccattgcgacgagca
atcatgaggctattggaagacagtatggcagaacgcatgctctctggagaaattaaggag
ggagactcagctatcatcgatgtagatggtgatggcaatgtcacagtgttaaatggcact
acgggaactgcttccaaaacagatacagatatggcccctgctggtattgcttga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (28)   

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