KEGG   Physcomitrium patens (spreading earthmoss): 112293488
Entry
112293488         CDS       T01041                                 
Name
(RefSeq) tubulin alpha-6 chain
  KO
K07374  tubulin alpha
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp04145  Phagosome
ppp04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112293488
  09142 Cell motility
   04814 Motor proteins
    112293488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112293488
   03036 Chromosome and associated proteins [BR:ppp03036]
    112293488
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ppp04812]
    112293488
   04147 Exosome [BR:ppp04147]
    112293488
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112293488
Chromosome and associated proteins [BR:ppp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112293488
Cytoskeleton proteins [BR:ppp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112293488
Exosome [BR:ppp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112293488
  Exosomal proteins of other body fluids (saliva and urine)
   112293488
  Exosomal proteins of colorectal cancer cells
   112293488
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 112293488
NCBI-ProteinID: XP_024398726
Position
16:complement(4062947..4065608)
AA seq 449 aa
MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGRMPSDTTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESTDGGPEDDDY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagagagattatcagcatccacataggccaggccggtattcaggtcgggaatgcgtgc
tgggagctgtactgtctggagcatgggattcagcccgatggtcgcatgccaagcgacacg
acggtaggaggtggcgacgatgcgttcaacacattttttagcgagacgggggcggggaag
cacgtcccgcgcgccgtgttcgtggatctggagcctacggtgatcgacgaggtccggacc
ggaacgtaccggcagctgtttcacccggagcagctgatttcggggaaggaggacgctgca
aacaacttcgctcgcggccattatactgtggggaaggagattgtggatctgtgcctggac
agggtgaggaagctggcagataactgcacggggctgcagggattcttggtgttcaatgct
gtaggaggcgggacgggatccgggctgggttctctgttgttggagaggttgtcggtggac
tacgggaagaagtcgaagctgggattcactatctacccgtctccccaggtgtcgactgca
gtggtggagccatacaacagcgtgctgtcgactcacagtttgttggagcacacagacgtg
gctgtgctgttggacaatgaggcaatttacgacatttgccgaaggtcgttggacatcgag
cggccgacgtacacaaatttgaacaggctgatatctcagatcatatcgagtctgacgacg
agtctgcggttcgacggcgcgctgaatgtagatatcacggagttccagacgaacttggtg
ccgtacccgcggatccacttcatgctgtcgagttacgctccggtgatttccgcggagaag
gcgtaccacgagcagttgtcggtgccggagatcacgaacgcggtgttcgagccatcgagc
atgatggcgaagtgcgatcctcgtcacggaaagtacatggcgtgttgcctgatgtacaga
ggggatgtggtgccgaaggacgtgaacgccgcggtggcgaccatcaagacgaagcgcacg
gtgcagtttgtggactggtgtccgacgggtttcaagtgcggaatcaactaccagccacca
acggtggtgcccggcggcgaccttgcgaaggtgcagcgggcggtgtgcatgatcagcaac
aacacggctgtggcggaggtgttttctcgaatcgaccacaagttcgatctgatgtacgcg
aagcgcgctttcgtgcactggtacgtgggcgagggtatggaggaaggcgagttttcggag
gctcgcgaggacttggcggctttggagaaggactacgaggaggtaggagcggagtcgacg
gacgggggtccggaggacgacgactactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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