KEGG   Physcomitrium patens (spreading earthmoss): 112293663
Entry
112293663         CDS       T01041                                 
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a-like
  KO
K14563  rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112293663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppp03009]
    112293663
Ribosome biogenesis [BR:ppp03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    112293663
SSDB
Motif
Pfam: Fibrillarin GCD14 PCMT Methyltransf_31 Methyltr_RsmB-F
Other DBs
NCBI-GeneID: 112293663
NCBI-ProteinID: XP_024399117
Position
16:complement(7985821..7987190)
AA seq 313 aa
MRPPLTRGGGGGGRGGFRGGRGGGRGDGGGRGGGRGFGGGRGGRGGDRGGRGMRGGGRGG
GRGGGGMKGGAKVIIEPHRHEGVFVAKAKEDALVTKNLVPGESVYGEKRISVDNEDGTKT
EYRVWNPFRSKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEF
SHRSGRDLVNMAKKRTNVIPIIEDARHPMKYRMLVGMVDVIFADVAQPDQARIVAINAHN
FLKNGGHFVISIKANCIDSTVPAEAVFASEVKKLQKEQFKPAEQVTLEPFERDHACVVGT
YRAPKKAKPASGA
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaggcctccattaacgagaggaggaggaggaggaggcaggggcggcttccgtggagga
cggggaggagggagaggcgatgggggaggtcgcgggggcgggcggggtttcggaggaggc
cgtggagggagaggaggcgacagaggcgggcgaggaatgcggggcggtggtagaggagga
ggaagaggtggtggtggcatgaagggaggagccaaggtcattatcgagccgcacagacac
gagggagtgtttgttgccaaggccaaggaagacgcgctcgtgacgaagaatctggttcct
ggcgagagtgtgtatggagaaaaacgcatttcggtcgataacgaggacggaaccaagacg
gaatatcgagtgtggaaccccttccggtccaagctcgcggctgctattttgggaggtgtg
gacaacatctggatcaagcctggtgctcatgtcttgtacctcggagctgcttcgggaaca
acggtttctcacgtttctgacgtagtgggaccttcgggcatagtgtacgcggttgaattc
tcacaccgcagtgggcgagacctcgtgaacatggctaagaagcgaactaatgtcattcct
attattgaagatgctaggcacccgatgaagtaccgtatgttggtcggtatggtagatgtg
atctttgccgatgttgcgcagcctgatcaagctcgaattgtagcaatcaatgcgcacaac
tttttgaagaacggtggtcacttcgtcatctctattaaggcgaattgtatcgactcaaca
gtgcctgccgaggctgttttcgcttcggaagtgaagaagttgcagaaggagcagttcaag
cctgctgagcaagttactcttgagccttttgaaagggaccatgcttgtgtagttggtact
tatcgtgcacctaagaaggctaagccagcttccggtgcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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