KEGG   Physcomitrium patens (spreading earthmoss): 112294604
Entry
112294604         CDS       T01041                                 
Name
(RefSeq) autophagy-related protein 18c-like
  KO
K22991  WD repeat-containing protein 45
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppp04131]
    112294604
Membrane trafficking [BR:ppp04131]
 Autophagy
  Other autophagy associated proteins
   Others
    112294604
SSDB
Motif
Pfam: PROPPIN WD40 BCAS3_WD40 ANAPC4_WD40 CPSF_A Nepo_coat_C RMC1_N
Other DBs
NCBI-GeneID: 112294604
NCBI-ProteinID: XP_024401018
Position
17:3858396..3861806
AA seq 441 aa
MSLAPSSEGDRHNKFNNEGIDPSFSSPPSSSSFTLSPQESPRPKSSSSALPPEQALLSVG
FNQDYGCFACGTQAGFRIYNCDPFKETFRRESDGTGVALVEMLFRCNILALVGGGKAPRY
SPNKVMIWDDHQNRYIGEISFWGEVRAVRLRRDRIVVVLEFKIYVYNFADLKLLHQIETF
GNTKGLCAVSSGPTSCILACPGQHRGEVRIELYNQKKTHFVQAHDSSLACLALSQNGALL
ATASNKGTLIRIFSTVDGTKLQELRRGAERTEIYSIAFSANAHWLAVSSAKGTVHVFSLK
PTTEEPRSEAMAAARPPSSNGSMASTFGGSSSYLLGASSSLLSFASTNAGSSLALIKGVL
PKYFSSEWSFAQFHLPEETRTIVAFGPQKNTVIIVCENCSFYRCSFDATRGGEMVQLEYE
RFMKQDEAEEQITAAQMRSVK
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgtccctagcaccatcctctgagggagaccggcataacaaattcaataacgagggcatt
gatccatcgttctcgtcgccaccctcttcctcttcgttcactctttctcctcaggagtca
cctcggccaaagagttcatcttcagcactgcctccggaacaagctctcctttctgtggga
ttcaatcaggattatggctgcttcgcttgtggcacgcaggcaggtttccgtatttataac
tgcgatcctttcaaggagacatttcgccgggagtctgatggaaccggtgttgctctagtg
gaaatgctgttcaggtgcaatattttggctctcgtcggcggtgggaaggctcccaggtac
tctcccaacaaggttatgatatgggacgatcaccagaatcggtacattggggagatttca
ttttggggcgaggtccgagctgtgcgtttgagaagggacagaattgtcgtggtgctggaa
ttcaagatttatgtgtacaattttgctgacctgaagctgcttcatcagattgagacgttt
ggtaatacgaagggtctttgcgcagtgtcttctggaccgacctcttgcatccttgcatgc
cctgggcagcaccggggagaggttcggatagagctttacaaccagaaaaagactcatttt
gtgcaggcgcacgactcttccctcgcttgtttggcactcagtcagaatggtgctctgttg
gccacggccagcaacaaaggcactctgattcgcatattcagcacggtggatggcacgaag
ttacaagagcttcgacgaggagccgagcgaactgagatctacagtattgctttctctgcc
aatgcacattggcttgctgtttctagcgccaagggcaccgtgcatgtgtttagtttgaag
ccaacaactgaagaacctcgctctgaggccatggcagcggcgaggccaccatcttcaaac
ggatcgatggcatcaacatttggtggaagcagcagttatctacttggtgcttcatcatca
ttattgtcatttgcatccacaaatgctggttcgtcactcgccttaattaaaggtgtcttg
cccaaatactttagctcagagtggtcgtttgcccaatttcatttgcccgaagaaacacga
acaatcgttgcatttggcccacagaagaatactgttataattgtgtgcgaaaactgcagt
ttttacaggtgttcatttgatgcaacccgtggtggggaaatggtacagcttgagtatgag
cgattcatgaagcaagatgaagcggaggaacaaattactgctgctcagatgcggagcgtg
aaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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