KEGG   Physcomitrium patens (spreading earthmoss): 112294940
Entry
112294940         CDS       T01041                                 
Name
(RefSeq) small RNA degrading nuclease 1-like
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112294940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppp03009]
    112294940
Ribosome biogenesis [BR:ppp03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    112294940
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-GeneID: 112294940
NCBI-ProteinID: XP_024401723
Position
18:complement(14802838..14807456)
AA seq 614 aa
MVSCAAFQAVSRAEFGIGFAMAAMKRQIYLTGFKETDHELLVKIVKGAQWRQIKGKQGDW
KEFVAMVNKKRGGTHSDPARHPVDVLAAFVQTFTKKEDVELVKRLRNWATYCSNQKLLNE
THPFAKTPEQELVDATQSHPRFGSFYNFPSWMEGWKHSKRGDPDSPVKLVSLDCEMVTCE
GDVKELVRVCAVGSDYNTLVDELVVPNGKVTDYLTSITGVSEKDLQRVTLSQAGVQKLVL
DLLTPGTILVGHSLHYDLRALQIDHKRVIDTSLLFRDPSWPPSYSPSLSNLCQSILKYKF
REDDKPHDCLDDSIVPMRLVHYRLEHAVSTLSLEFPRKEVNQGDLSKLFLHKLPSSISLT
LLRSIFPKDLACRIQDIMFKNRGKTGSTVAVFDSAEEADSAFEQLEGVLGKDSAGYPQKT
VSLMYPSGNQMRMAEFQVRKMVNSRSVIAPRQENEESQVMKACTKRPTVDDVVGENNDEP
KRRKISSGTAADARCSKVVELEDHDGINVPQTDSTSILGRSDSSKKTPWANKYQLLEQLN
DEDEEVEEGEISEGETKDAAERPGHKVCSCSHLQELEALKSELVKVRKESKSKADEIKSL
QKLVAALSRREGLA
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggtttcctgtgcagcgtttcaggctgtgtcgcgagcagaatttggaatcggcttcgcg
atggcggccatgaagcggcaaatatacttgactggattcaaggaaaccgatcacgagctt
ttggtgaagattgtgaagggggcgcaatggaggcagattaaggggaagcaaggtgattgg
aaggagtttgtggcgatggtgaataagaagaggggtgggactcatagtgaccctgctagg
catcccgtggacgtgcttgctgcatttgtccagactttcaccaaaaaagaagatgttgag
ctggtgaaaaggttgcggaattgggccacttattgttcgaatcaaaagttgttgaatgag
actcatccatttgcgaagaccccggaacaggagctggtggacgctactcaatcccatcca
cgctttgggtctttctacaacttcccatcttggatggaggggtggaaacattcgaagaga
ggagaccctgacagccctgtgaagctggtgtcacttgattgtgagatggtcacttgtgaa
ggtgatgtcaaagaacttgttcgcgtatgtgctgttggtagtgattacaatactttagtt
gacgagttagttgtgcccaacgggaaggtgactgactacttaacaagcattactggggtt
tcagagaaggatctacaaagagtcaccttgtctcaggctggcgttcagaagctggtgttg
gatttattgactccaggcactattcttgttggacatagcttacactatgatttgagagct
ttgcaaatcgaccataaacgggtgatcgacacatctttgttgtttcgagaccctagttgg
ccgccttcttactctccaagcctttccaatctttgccaatctatcttgaagtacaagttt
agggaggatgacaaacctcacgattgcttagacgactccattgttccaatgcgattggtt
cattatcggctcgagcatgctgtcagcactttgtctcttgaattcccgcgaaaggaggta
aatcaaggagatttatccaaattattcttgcacaagctgcctagctcgatctctttaact
ttgcttaggtctatctttccaaaagatctagcctgtcgaattcaggatatcatgttcaag
aatagagggaaaacaggctcaactgtagccgtttttgatagcgctgaagaagcagacagt
gcgttcgagcagctggagggagtgttgggcaaggattcagccgggtacccacaaaagaca
gtgagcttgatgtacccgtcaggaaatcaaatgagaatggcagaatttcaagtgcgcaaa
atggtgaactctaggtcagtgatcgcacctagacaggaaaacgaggaatctcaagtgatg
aaagcctgcacaaagaggccaacagttgacgacgtcgttggtgagaataatgacgaaccc
aaacgacggaaaattagctccggtactgctgcggatgcgaggtgtagtaaagtggttgaa
ttggaggaccatgatggtatcaatgtaccacaaactgacagcacgtccatattggggcga
tcagattcctcgaaaaaaacaccttgggcgaacaaataccagctcttggagcaactaaac
gacgaggatgaagaggtagaagaaggagagatttccgaaggggaaactaaggacgcagct
gaacggcccgggcacaaagtatgctcctgctctcatctccaagagctagaagctttgaaa
tcagaactcgtcaaagtgcgcaaggaatcaaaatctaaagcagatgagatcaagtcgtta
cagaagttagttgctgcattgtctcgcagggaaggtcttgcttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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