KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_016850
Entry
PPSQR21_016850    CDS       T03178                                 
Symbol
nei
Name
(GenBank) formamidopyrimidine-DNA glycosylase (fapy-DNA glycosylase)
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ppq  Paenibacillus polymyxa SQR-21
Pathway
ppq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PPSQR21_016850 (nei)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppq03400]
    PPSQR21_016850 (nei)
Enzymes [BR:ppq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PPSQR21_016850 (nei)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PPSQR21_016850 (nei)
DNA repair and recombination proteins [BR:ppq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PPSQR21_016850 (nei)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N RNHCP
Other DBs
NCBI-ProteinID: AHM65337
Position
1912601..1913431
AA seq 276 aa
MPELPEVETIKRTLNELIVDKHIDHVTVNLPRIIQRPDDIHAFAMELADHQIIGVERRGK
FLRILLDGLVLVSHLRMEGRYGLYSQDDPVEKHTHVIFHFKDGTELRYQDVRQFGTMHLF
PAGQDLLEKPLNKLGLEPMDEAFTPEMLRAAVGTRSTSIKAALLNQSYVVGIGNIYVDES
LFKAGIHPAQPAKSLTDSQFRVLHEAIVSTLGASIQVGGSSIKSFVNGQGKTGDFQHQLQ
IYGRNAKPCINCGTLIEKSVVAGRGTHHCPVCQPLR
NT seq 831 nt   +upstreamnt  +downstreamnt
atgccggaattaccggaagtagaaaccattaaacgaacactaaacgagctaatcgtcgat
aaacatatagatcatgtaaccgtaaatttgccgcgtattatccaacgtcccgatgatatc
cacgcatttgcgatggaattggctgaccaccagattattggggtggaaagacgcggtaag
tttctgcggattttgctggacgggctagtgcttgtctcccatcttcgaatggaaggacgc
tatggattgtattcacaagatgatcctgtggaaaagcatacccatgtcatctttcatttt
aaagatggtacagagctgcgttatcaggatgtacgccaatttggtacaatgcacttattt
ccggcagggcaggatttgctggaaaagccgctgaataaactcggtctggaaccgatggac
gaggcttttacacctgaaatgctgcgtgccgctgttgggactcgttcgacttcgatcaag
gcagcgctgttaaaccagtcatatgtggtaggcatcgggaatatttatgtagatgaatcg
ttatttaaggcagggattcatccggcacagccagccaaaagcctaacggatagccaattt
cgcgtactgcatgaagctattgtctccacgctgggcgcgtcgattcaggttggtggctcg
tccatcaaatctttcgttaacggacagggcaaaacgggcgatttccagcatcagttgcaa
atctatggacgcaacgcgaagccttgtattaactgtggtacattgatcgaaaaatccgtc
gtagctggacgtggcacacatcattgcccggtctgccagcctttgcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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