KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_018070
Entry
PPSQR21_018070    CDS       T03178                                 
Name
(GenBank) ribosomal small subunit pseudouridine synthase a
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
ppq  Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppq03009]
    PPSQR21_018070
Enzymes [BR:ppq01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     PPSQR21_018070
Ribosome biogenesis [BR:ppq03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    PPSQR21_018070
SSDB
Motif
Pfam: PseudoU_synth_2 S4 Ribosomal_S28e
Other DBs
NCBI-ProteinID: AHM65456
Position
2023308..2024090
AA seq 260 aa
MSGKGRQTQRLDKILTHMGYGSRSDIKRQVKQGMITVNGRIIKDSGLQVHPYQDQIEVNG
ELVVFREFIYIMLHKPPGVISATEDTRERTVLDLLSAEERHFEPFPVGRLDKDTEGLLLL
TNDGKLAHELLSPRRHVPKTYEATVLGLVTEEDILQFTAGVELDDGYVTLPAQLTILRHE
QPHQADGEVISYISLVIHEGKFHQVKRMFEAVGKKVTYLKRTAMGPLKLDDQLPLGSYRE
LTSEELALIGRDIVSATSEA
NT seq 783 nt   +upstreamnt  +downstreamnt
atgagtggaaaaggaagacaaactcagcgtttagacaaaattttgacccatatgggctat
ggttcccgtagtgatatcaagagacaggtaaagcaaggtatgatcacagtaaacggacgg
atcatcaaggatagcggcttacaggttcatccatatcaagatcaaattgaagtgaacggc
gaacttgttgtttttagagagtttatttacatcatgctgcacaagcccccaggtgttata
tctgcaaccgaagatacgagggaacgaacggtgctggatttgctgagtgcggaggaacga
catttcgagccttttccagtagggcggctagataaagatacagaaggcctattgttattg
accaacgatggcaagctggcgcacgaactactatctccgaggcgtcatgtccccaaaacg
tatgaagctacggtgttgggacttgtcacggaggaggatatccttcaatttacagcagga
gtggaactggacgatgggtatgtcacccttcccgcgcagttgacgattcttcggcatgaa
cagccgcatcaggcagatggggaagtcatttcctatatttcgcttgtaatccatgaaggt
aagtttcaccaagtgaagcgcatgttcgaggcggttggtaaaaaagtgacctacttgaaa
agaacagccatggggccattgaagctggatgatcagcttccactgggcagctatcgagag
ctgactagcgaagaactggcattgatcggccgtgatatagtttccgcaacatcagaagct
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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