KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_030900
Entry
PPSQR21_030900    CDS       T03178                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ppq  Paenibacillus polymyxa SQR-21
Pathway
ppq00300  Lysine biosynthesis
ppq00470  D-Amino acid metabolism
ppq01100  Metabolic pathways
ppq01110  Biosynthesis of secondary metabolites
ppq01120  Microbial metabolism in diverse environments
ppq01230  Biosynthesis of amino acids
Module
ppq_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PPSQR21_030900 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PPSQR21_030900 (dapF)
Enzymes [BR:ppq01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PPSQR21_030900 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AHM66732
Position
complement(3527993..3528826)
AA seq 277 aa
MEFTKMNGLGNDFIVWYGHQELPSDASELAVRLCDRHFGIGADGLVYILPSEKADFRMRI
INSDGSEAEQCGNAIRCAAKYVYDRKHINREQITIETLGAGVQQVELTVENGTVRMVKVD
MGEPILEGLKIPTTLDLTNVIDEPIEAGGSGFRFTAVSMGNPHCVIYVEDAPSFDLEAWG
PKLECHPLFPKKTNVEFATVRSRKHIDMRVWERGAGPTLACGTGACATLVASVLNGYSDR
RAMVSLKGGDLDIEWSEDDNHIYMTGPAEIVFEGRLF
NT seq 834 nt   +upstreamnt  +downstreamnt
atggaattcactaaaatgaatggtctgggtaatgattttatcgtttggtacgggcatcag
gaattgccgtctgacgcctcggaattagctgttcggctatgtgatcgacattttggtatt
ggcgccgatggattggtatatatattgccgtctgaaaaagcagattttcgcatgcgcatc
attaactcggacggctcggaggccgagcaatgcggtaacgctattcgttgtgctgccaaa
tatgtgtatgaccgtaagcatatcaaccgtgaacagatcacgattgagacgctgggtgca
ggtgtgcaacaggttgaactgactgtggaaaacggaactgtacgaatggtaaaggtagat
atgggagagccgattctggaaggattgaaaattccaactacactcgatttgactaacgta
atagatgagcccattgaagctggaggaagtggttttcgctttacggctgtttctatggga
aatccgcactgtgtcatttatgttgaggatgcgcctagctttgatctggaggcctggggg
ccaaagctggagtgtcatccattgttccctaaaaaaacaaatgttgagttcgccacggta
cggagtcggaagcatatagatatgagggtatgggagaggggagcaggacctacgctagcc
tgtggaaccggagcctgtgctacgcttgttgcttctgtactaaatggatacagcgaccgc
cgcgccatggtaagcctaaagggcggcgatctggatattgaatggagcgaggatgataat
cacatttatatgacaggtccggctgagattgtattcgaaggtcgtctattctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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