KEGG   Photobacterium profundum: PBPRA0098
Entry
PBPRA0098         CDS       T00173                                 
Symbol
AGAD
Name
(GenBank) putative peptide ABC transporter, ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
ppr  Photobacterium profundum
Pathway
ppr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PBPRA0098 (AGAD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppr02000]
    PBPRA0098 (AGAD)
Transporters [BR:ppr02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    PBPRA0098 (AGAD)
SSDB
Motif
Pfam: ABC_tran AAA_21 oligo_HPY SMC_N AAA_29 AAA_22 PRK TniB RsgA_GTPase AAA_16 nSTAND1 Mg_chelatase AAA APS_kinase AAA_23 AAA_33 NTPase_1 DUF87 AAA_5 MeaB G-alpha
Other DBs
NCBI-ProteinID: CAG18538
UniProt: Q6LVY7
Position
1:98233..99951
AA seq 572 aa
MSLLEVKNLRIEYPSRHGVHAAVKSLSFSIERGEIVGVVGESGAGKSTVGNAVIDLLSPP
GKVASGDVYLDGDKISGLSSEEMRKIRGSKIGFIFQDPMTSLNPLFTVEQQITETILTNL
KVTKAEAYTRAISLMEQVGIPEPELRIKQYPHQFSGGMRQRVVIAIALSGEPDLIIADEP
TTALDVSIQDQILTLIRNLCIEKNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEIGTTEQ
VLSRPNHPYTKSLISAVPRSDVKLSRFPLVSYIEEAHELTKLDVKTHWLGQSEDQRSYTG
ALLQVENVNLRFTTKDSFFESRREYVQASNNVSFEIYEGETFGLVGESGSGKSTIARVIA
GLYPPNSGKVTFEGIDLTALKSEKERRPMRRQMQMVFQNPYSSMNPRMKIFDIIAEPIRF
HKLSDNEAQTRQIVHDLLDHVGLGRAASVKYPHEFSGGQRQRISIARALATRPRLLICDE
PTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRIGVMRQGTLLEVSPTE
QLFTAPQHEYSKHLIDLMPEFKGMSQEGLKLA
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgtcattattagaagtaaaaaatctccgtatagaatatccctctcgtcatggagtacat
gccgctgttaaatcactctcgttctctattgaacgtggtgagatagtcggtgttgtgggt
gagtcaggcgccggtaagtcgacagtaggtaatgctgttattgatttattgagcccgcca
ggaaaggtcgcgagcggtgatgtttatctggatggcgataaaatctcgggtttatcatca
gaagagatgagaaagattcgaggctcaaagattggatttattttccaagatccgatgacg
tcgttaaacccgctatttacggttgagcaacagataacagaaactatcttaacgaattta
aaggtaacgaaggctgaagcctatacgcgtgctatcagtttaatggagcaggttggtatt
cctgagccagaacttcgtataaaacagtatccgcaccaattttctggtggtatgcgtcaa
cgtgtggtgatagcgatagcactatcaggtgaacctgatctgatcattgccgatgagcca
acaaccgcactcgatgtatcaattcaagatcaaatccttactcttattcgtaacctttgt
atcgagaagaatgtcggctgtatgctggtcactcacgatatgggcgttgtatcgaatgta
accgatcgggttgcggtaatgtatcgtggtgatttggttgagattggtacgactgaacaa
gtattgagtcgccctaaccacccgtatactaaaagtttaatttctgctgtaccgcgttct
gatgtgaagcttagtcgtttcccgttagttagctatatcgaagaagcgcatgaattaacc
aaacttgatgtaaaaacgcattggttgggtcaaagtgaagatcagcgcagttacaccggt
gctttgcttcaggttgaaaacgtgaatttacgttttacgacgaaagattcattctttgaa
agtcgccgtgaatatgtgcaagcctctaataatgttagctttgaaatttatgaaggcgag
acatttggtttagtgggtgaatcgggttctggtaaatcaacaattgcgcgtgttattgct
gggctatacccgcctaattcaggcaaagtaacgttcgaaggcattgatcttaccgcactt
aaaagtgaaaaagaacgccgcccaatgcgtcgtcagatgcagatggtgttccagaatccg
tattcttcaatgaacccacggatgaaaatattcgatattattgctgagcctatccgtttt
cataaactgtctgataatgaagcgcaaacgcgtcaaattgtgcatgacttattggatcat
gtgggtttaggccgtgcagcaagcgtgaaatatccccatgaattctctggtggtcagcgt
cagcgtatttctatcgctcgcgcgcttgctactcgccctcgtttattaatttgtgatgag
ccgacatctgcattggatgtatcggtgcaagcacagattcttaatctgctgaaagatctg
caggatgagttaaaccttaccatgctattcattagccatgatttacccgttatacgacaa
atgtgtgaccgtattggtgtaatgcggcaaggaacactgttggaagtctcgcctaccgag
caactgtttactgcacctcagcatgagtacagcaaacacctgattgacttaatgcctgag
tttaaagggatgagccaggaaggattaaaattagcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (80)   
   KEGG ORTHOLOGY (2)   
   RefGene (76)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (106)   

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