KEGG   Photobacterium profundum: PBPRA2482
Entry
PBPRA2482         CDS       T00173                                 
Symbol
VV1227
Name
(GenBank) putative pseudouridine synthase family 1 protein
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
ppr  Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:ppr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppr03009]
    PBPRA2482 (VV1227)
Enzymes [BR:ppr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     PBPRA2482 (VV1227)
Ribosome biogenesis [BR:ppr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PBPRA2482 (VV1227)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: CAG20864
UniProt: Q6LPB2
Position
1:complement(2875243..2876376)
AA seq 377 aa
MSIMSEKLQKVLARAGQGSRREIELMIQSGRVSIDGVVAKLGDRLDDFSVLVRIDGHKID
LVSPSEEVCRVLAYNKPEGELCTRHDPEGRRTVFDRLPRLSSGRWVSVGRLDANTSGLLL
FTTDGELANRLMHPSRSVEREYMVRVFGEINENMVKNLVQGVELEDGMARFEDVVYSGGE
GMNHTFYVVITEGRNREVRRLWDSQGVTVSRLKRVRYGDIYLTKDMPRGGWMELELKEVN
YLREVVELEAEENTMLTVEGLKRKRGVRQIRRAVRRHEERVTETPRGRRGRTNTPDERRS
STRNSEAEGQNVPVGKRKPSGKPSTAKPTRGKPSAGKPAQGNRRKTDDCNEPAGKRKPSG
NGAQRRNPLAVKPRTRQ
NT seq 1134 nt   +upstreamnt  +downstreamnt
ttgtctataatgagtgaaaagttacagaaggtgctagcgcgtgctggccaagggtctcgt
cgtgagatcgaattaatgattcaaagcggtcgtgtgagcattgacggcgtagtcgcgaaa
ttgggtgatcgtctagacgatttttctgttctcgtgcgtatcgatggtcacaagattgat
ctggtttcgccttctgaggaagtgtgtcgtgttcttgcttataacaaacctgaaggtgag
ttatgtacgcgtcacgatcctgaaggtcgccggactgtatttgatcgtttaccccgtcta
tcaagtggtcgttgggtttcggttggtcgattggatgcaaatacctcaggtctattgtta
tttaccactgatggtgaattagctaaccgcctgatgcacccaagccgaagtgttgaacgt
gaatacatggttcgcgttttcggtgagattaacgaaaatatggttaagaacctagttcaa
ggtgttgaactagaagatggtatggcacgtttcgaagacgttgtgtattctggcggcgaa
ggtatgaaccatactttctacgttgtgatcacagaaggccgtaaccgtgaagttcgtcgt
ttgtgggattcacaaggcgtaacagtaagtcgtctaaagcgtgtacgttatggtgatatc
tatctaacgaaagatatgcctcgtggcggttggatggagctcgagctgaaagaagttaac
tatcttcgtgaagtggtagagcttgaagctgaagaaaacacaatgttgacggtcgaaggc
ctgaagcgtaaacgtggtgttcgtcagattcgtcgtgccgtacgtcgtcacgaagaacgt
gttactgaaacacctcgtggtcgtcgtggtcgcacgaatacccctgatgaacgtcgttct
tcaacgcgtaacagtgaagctgaagggcaaaatgtaccagttgggaagcgtaagccgtca
ggtaagccttcaacggctaagccgacacgcggcaagccatctgctggtaagccagcgcaa
ggcaatcgtcgtaaaacagacgattgcaatgagccagcaggtaagcgtaaaccgtcaggt
aatggtgctcaacgtcgtaacccattagcggttaagccacgtacgcgtcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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