KEGG   Photobacterium profundum: PBPRA3271
Entry
PBPRA3271         CDS       T00173                                 
Name
(GenBank) hypothetical MSHA biogenesis protein MshQ
  KO
K12287  MSHA biogenesis protein MshQ
Organism
ppr  Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:ppr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppr02044]
    PBPRA3271
Secretion system [BR:ppr02044]
 Type II secretion system
  MSHA pilus biogenesis protein
   PBPRA3271
SSDB
Motif
Pfam: DUF6701 Bactofilin
Other DBs
NCBI-ProteinID: CAG21577
UniProt: Q6LMA0
Position
1:complement(3706516..3710058)
AA seq 1180 aa
MNYYYRVVFSAFLFFFSLSVNAACEGLKINKGFDVVFRIENSSQDESVIAIGNNSRIKIL
WSNNPNESAVINDVWTVTGGRYDIWLHFIPGKNKNFPGELQYYMYRPDINPDGWSWVTSK
SAVLSGMSNNISVAGNNVNILNCSGTLEPPEPPKPPELDYCELFPGPVQTWKNNPHNLIT
SDRGTKINNTSEYKIGFTNEVVDSGYPKVYTPEGMLQGKCDDNTCLLTGTQATKKVLHWD
DSRASIVVKNKVITVDEIASPSTYFTAAYGWTYGLTIEPRGHLTLPAGEYWVDAADIRGQ
LIIDGNVVLHVWNKLDIGGSVNTLNPTDNLTVFAYNSGGSCPLPANFPHGPPQVNTSYAV
NINIAGQFNGRIYSQGPVALSNATTLIGAVTACQLQMSNTAKIIGQSECFDPQPKNTLKI
TPKTAFGLTCERMPVTFSVRKENGDLDTNYSGTLNASVTSVNSTNSCWALTEDAAECSEG
DITTSLPGGQRRLWLQSKTAGEITIEGATGDLSNNAGPYRFAPFGFRINGGDPAKMVAGK
TETLLIEAVADTGAKCEVIEDYGKVEGEVKKLKITSLDFVRPTTGSKSLNIDGSTLADGA
SKTKRIQFKQGKALLPVTYNDAGEITFELLDKKWKPKDCKANSTDCDDRERDWKGLKGKA
VIYSRPYTFALCGIQSAGGKTDFLGTSSSGNGFAAAGETFSVTFKPIIWTADLDDPITDN
SSDGNNDVVTTASSWCQVAMTPNYYSVEALNLSAPLNLSIPDAPHSPVPEEGTANKGELA
GTVSTSFTQGQAQDGLTVSNLTWSEVGSLWLQADATYLEMKLDQGVSTLGRFYPHHFALK
SSELVDAVPNKFTYMDQRFTTSFDVEAQNEAKQATLNYGDFAVGYQEALGLVAIDGGVTD
TKKNELTPRLDNGLLPSGWGQNWSKAVLKVENASVGFKREVTPPPPGISPPPSKITTPDG
PYDVRVGLVANIPSDCATRGCTDFADQDLEVRDTDDVTPEKAIALAGNITARYGRLKLDD
ANSQFDKAVNIPVRAQYWDSSVTAFVLNTDDSTSKFNGNNYCKQVVWATKPDQSNSILAE
DGQVSEGKNFTITADPKTSEYYREQVRFWLRLASSPHLGEDGITCNGTAPIANDYYRPWL
QYNWRNKGDENPSAVVTFGVYRGNDRIIYRGEKGMNQLLN
NT seq 3543 nt   +upstreamnt  +downstreamnt
atgaattattattaccgagtggtttttagcgcgtttctattcttttttagtctgtcggta
aatgcggcatgtgaaggcctgaaaatcaataaagggtttgatgttgtttttaggattgaa
aacagtagtcaggacgagagtgttattgcgatagggaataactcgcgcataaaaatatta
tggtcaaataatcccaacgaatcagccgtcattaatgatgtctggactgttactgggggc
cgttatgatatctggctgcattttattcccggtaagaataaaaatttcccgggagagctg
cagtattatatgtatcgccctgatattaatcctgatggctggtcctgggtgacttcaaaa
tctgcagttctttcaggtatgagtaataatatttctgtggctggaaataatgtaaatatt
ttaaattgcagcggaactctggagccacccgaaccaccgaagccgccagaactcgattat
tgtgagctgtttccggggccagtacagacttggaaaaataatccgcataacctaattact
tctgaccgtggtacaaaaatcaataataccagtgagtataagatcggttttaccaatgag
gtagttgatagtggctacccgaaagtttataccccagaaggtatgcttcaggggaagtgt
gatgataatacctgtttgctaactggtactcaggcgacaaaaaaagtgttgcactgggat
gattcgagggcatcaatcgttgttaaaaataaagtcatcactgtagatgaaatagctagc
cctagtacctattttacggcagcttatggttggacatatggtttaactatcgaacctcgt
ggtcatttaaccttacctgccggtgaatattgggtggatgccgctgatattcgtggtcag
ctcatcattgacggtaatgttgtccttcatgtatggaacaaattagatatcggcggttcg
gtgaatactttaaatcctaccgataatctgacagtttttgcctataactccggaggctcg
tgtcctttgcctgctaatttcccgcatggccctcctcaggtaaataccagctatgcggtt
aatatcaatatcgcagggcagtttaacggccggatctattcacaaggtccagtggcctta
tccaatgcgacgactctaattggtgcggtaacagcttgtcagctacagatgagtaatacc
gcgaaaattatcggacaaagcgagtgttttgatccacaaccaaagaacaccctgaagatc
acgccgaaaactgcatttggtttgacctgcgagcggatgccggtgacgttctccgtacgc
aaagaaaacggggatctcgataccaattattccggaacactgaatgcgtcagtgacctcg
gtcaattcgacgaacagttgctgggcgctgacagaagatgcggcagagtgcagcgaggga
gacataacgacctccttacccggtgggcagagaaggttatggctgcagagcaagactgct
ggcgagatcacgattgaaggcgcgacaggtgatttgagtaataacgccgggccttatcgt
tttgcaccctttggctttcggattaatggtggtgatcccgctaaaatggttgccggcaaa
accgaaacgttattgatagaagcggtggcagatacgggcgcgaaatgtgaagttatcgaa
gattacggtaaagttgagggtgaagtgaagaaattaaagatcacctcgctggattttgtt
cgaccgacaaccggtagtaagagcctgaatattgatggttcaacgcttgccgatggtgct
tcaaaaacaaaaagaattcagtttaagcaaggtaaagcgcttctccctgtcacctacaac
gacgccggagaaattacctttgagttgcttgataaaaaatggaagccgaaagactgcaag
gccaacagtacagactgtgacgaccgtgaaagggattggaaagggctgaaaggcaaagcg
gttatttattcgcgtccgtatacctttgcgctgtgtggtattcaatcggctggcggtaaa
acagatttcctcggtacatcttcgtcaggaaatggctttgcggcggctggcgaaacattc
agtgttacctttaaacctattatttggaccgcagatttagatgacccaatcacggataat
agtagtgacggtaataacgacgttgttactaccgctagttcgtggtgtcaggtggcgatg
acacccaattattattctgtcgaggcactgaatttgtctgcgccgctgaatttatcgatc
cctgatgctcctcactctccggttcctgaagagggaactgcgaacaaaggagagttagct
ggaacggtatctacgtcattcacccaagggcaggcacaagatggcttaaccgtaagtaat
ctaacctggagcgaggtagggagcctgtggctgcaggctgatgcgacctatctcgaaatg
aagctggatcaaggggttagtactctgggccgtttttatcctcatcactttgctttaaaa
agtagtgagttggtggatgccgtacctaataaattcacttatatggatcagcggtttacg
acgagctttgacgttgaggcacaaaatgaagccaaacaagcgacgttaaattatggtgat
tttgccgtaggttatcaagaagcgttgggtttagtggcaattgatggcggcgtaacggac
accaagaagaatgagctaaccccgcgtctggataacgggttattaccatcaggttggggg
caaaactggtctaaggcagtgttgaaggtcgagaatgcctcggtaggatttaagcgcgag
gtaactccgccacctccaggcatcagtccgccaccatccaaaatcaccacacccgatggt
ccttatgatgtgcgggtcgggttagtggccaatataccttcggattgtgctaccagaggc
tgtacagactttgccgaccaagacttagaggtacgtgatacagatgacgtaaccccggaa
aaagctatcgcgctggcgggtaatattaccgcccgttacggtcgtctgaaacttgacgat
gcaaacagtcagttcgataaagcggtcaatatacctgttcgtgcacaatactgggattca
tcggtaaccgcgtttgtgctcaataccgatgacagcaccagcaagtttaatggcaacaat
tactgcaagcaggtggtttgggcaacgaaaccggatcaatcgaactctattttggctgag
gatggtcaagttagtgaaggtaagaacttcacgatcaccgctgatccgaaaacttccgag
tattatcgtgagcaggttaggttctggttacgtttggcctcttcacctcacttgggagaa
gatggaataacctgtaatgggaccgcaccaatagctaacgactattatcgcccttggttg
caatacaactggcgcaataaaggcgatgaaaacccatctgctgtcgtcacctttggtgtt
taccgtggcaacgacagaattatttatcggggcgaaaagggcatgaatcagctgcttaac
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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