KEGG   Pseudomonas protegens CHA0: PFLCHA0_c00040
Entry
PFLCHA0_c00040    CDS       T02671                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pprc  Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:pprc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pprc03032]
    PFLCHA0_c00040 (gyrB)
   03400 DNA repair and recombination proteins [BR:pprc03400]
    PFLCHA0_c00040 (gyrB)
Enzymes [BR:pprc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PFLCHA0_c00040 (gyrB)
DNA replication proteins [BR:pprc03032]
 Prokaryotic type
  DNA Topoisomerases
   PFLCHA0_c00040 (gyrB)
DNA repair and recombination proteins [BR:pprc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PFLCHA0_c00040 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: AGL81811
UniProt: A0A2C9EDT9
Position
3913..6330
AA seq 805 aa
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELILTVRRSGKIWEQTYVHGVPQERMKIVGDSETTGTQIHFKPSAETFKN
IHFSWDVLAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQV
FHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD
FLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDDAMEDYMTQSALEDASLHLNEEAPGISGEALERLVNDFRMVMKTLKRLSR
LYPQELTEHFIYLPAVTMEQLSDHAAMQDWLAKYDARLRTSEKSGLVYKASLREDRERNV
WLPEVELISHGLSNYVTFNRDFFGSNDYKTVVSLGAQLSTLLDEGAYVQRGERKKAVTEF
KEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSMRRMLKVTIEDAIGADQIFNT
LMGDAVEPRRDFIESNALAVSNLDF
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgagcgaagaaaatacgtacgactcgaccagcatcaaggtgctgaaaggtttggatgcc
gtacgcaaacgtcccggtatgtacattggcgacaccgatgacggcagcggtctgcaccac
atggtgttcgaggtggtcgataactccatcgacgaagcgctggccggtcattgcgacgac
atcagcatcatcatccatccggatgaatccatcaccgtgcgcgacaacggtcgcggcatc
ccggtcgatgtgcataaagaagaaggcgtctccgcggcagaggtcatcatgaccgtgctc
cacgccggcggtaagttcgacgacaactcctacaaggtctccggcggtctgcacggcgta
ggtgtatcggtagtgaacgccctgtccgaggagctgatcctcaccgtgcgccgtagcggc
aagatctgggaacagacctatgtccacggtgttccgcaagagcggatgaaaatcgttggt
gacagcgaaaccaccggtacccagatccacttcaagccttcggctgaaaccttcaagaac
atccacttcagctgggacgtcctggccaagcggatccgtgaactgtccttcctcaactcc
ggtgtcggcatcgtcctcaaggacgagcgcagcggcaaggaagagctgttcaagtacgaa
ggcggcctgcgggcattcgttgaatacctgaacaccaacaagactgcggtcaaccaggtg
ttccacttcaacatccagcgtgaagacggcatcggcgtggaaatcgccttgcagtggaac
gacagcttcaacgagaacctgttgtgcttcaccaacaacattcctcagcgcgacggcggt
acccacctggtgggcttccgttcggccctgacccgtaacctgaacaactacatcgagcag
gaaggcctggccaagaaacacaaggtcgccaccactggtgacgacgctcgtgaaggcctg
accgcgatcatctcggtgaaggtgccggatccgaagttcagctcccagaccaaggacaag
ctggtttcttccgaagtgaagaccgcggtcgaacaggagatgggcaagtacttctccgac
ttcctgctggaaaaccccaacgaagccaagttggtggtgggcaagatgatcgacgctgcc
cgcgctcgtgaagcggcgcgtaaagcccgtgaaatgacccgtcgcaaaggcgcgctggat
atcgccggcctgccgggcaaactggcggactgccaggaaaaggatccggccctgtccgaa
ctctacctggtggaaggtgactctgctggcggttccgccaagcagggccgcaaccgcaag
acccaggcgatcctgccgctcaagggcaagatcctcaacgtcgagaaggcacgcttcgac
aagatgatctcctcgcaagaggtgggcaccctgatcaccgcgctgggctgcggcatcggc
cgtgaagagtacaacatcgacaagctgcgttatcacaacatcatcatcatgaccgatgct
gacgttgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagttgccg
gagctgatcgagcgcggctacatctacatcgcccagccgccgctgtacaaggtcaagaaa
ggcaagcaagagcaatacatcaaagacgacgacgccatggaagactacatgacccagtcg
gctctggaagatgccagcctgcacttgaacgaagaagcccccgggatctccggcgaggcg
ctggagcgcctggtcaacgacttccgcatggtgatgaagaccctcaagcgcctgtcgcgc
ctgtacccgcaggagctgaccgagcacttcatctacctgccggccgtgaccatggagcaa
ctgtccgaccacgccgccatgcaggattggctggccaagtacgacgcccgcctgcgcact
tccgagaagtccggcctggtctacaaggccagcctgcgcgaagaccgtgaacgcaatgtg
tggctgccagaggtcgagctgatctcccacggcctgtccaactacgtcaccttcaaccgc
gacttctttggcagcaacgactacaagaccgtcgtctccctcggcgctcaactgagcacc
ctgctggacgaaggcgcgtatgttcagcgcggcgaacgcaagaaagccgtcaccgagttc
aaggaggccctggactggctgatggcggaaagcaccaagcgccacaccatccagcgatac
aaaggtctgggcgagatgaaccctgaccagctgtgggaaaccaccatggacccaagcatg
cgccgcatgctcaaggtgaccattgaagacgccatcggcgccgaccagatcttcaacacc
ctgatgggtgatgcggtcgagcctcgtcgcgacttcatcgaaagcaacgccctggcggtg
tccaacctggacttctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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