KEGG   Pseudomonas protegens CHA0: PFLCHA0_c07520Help
Entry
PFLCHA0_c07520    CDS       T02671                                 

Gene name
recB
Definition
(GenBank) exodeoxyribonuclease V beta chain RecB
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
pprc  Pseudomonas protegens CHA0
Pathway
pprc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pprc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PFLCHA0_c07520 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pprc03400]
    PFLCHA0_c07520 (recB)
Enzymes [BR:pprc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     PFLCHA0_c07520 (recB)
DNA repair and recombination proteins [BR:pprc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PFLCHA0_c07520 (recB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 AAA_11 AAA_12
Motif
Other DBs
NCBI-ProteinID: AGL82546
UniProt: A0A2C9EFW7
Position
865506..869198
Genome map
AA seq 1230 aa AA seqDB search
MTAQAPLALAFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGGEAAGFGRELLPPQILV
VTFTDAATKELRERIRTRLAEAARFFRDETSAPDGLIVELREQYPVEQWAACANRLDIAA
QWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGQVLRDYWRLFCYPMQGD
ALNWVRSHWVGPAELMPRVRAMFGNERRDPPEQTPSELIEACLQERREALVQIKAPWREW
AAQLREICLQGVASKSVDGRKMQARFFEPWFEKISAWAEDESVEQLDIGTGFTRLTPEGM
SEAWKGAAPDHPGLDAMAVLKASLDALPSPDAAVLQHAAQWVGARFEEEKRRRAEMGFDD
MLLRLDSALQSDGGERLATLIREQFPVALIDEFQDTDPVQYRIFESIYRIEANDPETGLF
LIGDPKQAIYAFRGADIYTYLRARQATSGRLHTLGTNFRSSQAMVSAVNHVFLQAEQRPQ
GQGAFLFREADGENPVPFLAVAAQGRKEQLLVDGQPVPALNFWQLPSEQPLSGAQYRQHQ
AAACATAIVGLLNGGQQGRSGFVREQQALKGLLPADIAILVRDGKEAQAVRGELAARGVR
SVYLSDKDSVFAAQEARDVLVWLKACAEPDVERPLRAALASLTLNLPLLELERLNQDELA
WEARVMQFRGYRAIWRSQGVLPMLRRLLHDFQLPQALMARSDGERVLTNLLHLSELLQQS
AAELDGEQALIRHLAEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVLLPFI
CSTKPVDGSRLPLHYHDAAGKPQVSLRPTPELIALADEERLAEDLRLLYVALTRAQHACW
LGVADLKRGNHSSSVLHLSALGYLLGGGDVLGESSALLRWLLDLQQGCAAIGVSELPVVD
DQRYQPPRNEATLLAPLTPSRRAAENWWIASYSALRISDILGAGSTEAPENPQAQKLFDD
ERLDPEAPRETLASGGDIHRFPRGPNPGTFLHGLLEWAGEEAFAAAPEAIEDAVARRCNR
RGWQGWIPTLSDWLQHLLQAPLPLGEGQAPVVLGQLTQYRVEMEFWFASHKVDVLKLDER
VRQQTHQGAPRVTAEPVLLNGMFKGFIDLTFEHQGRYYVADYKSNWLGADDAAYTEQAME
QSILDNRYDLQYVLYLLALHRQLKARLADYDYDRHVGGALYLFLRGTRAASQGAYFARPP
RQLIEQLDRMFQGQPEPPKAEPAWEQGVLL
NT seq 3693 nt NT seq  +upstreamnt  +downstreamnt
atgactgcacaagctcccctggccctggcatttcctctgcgcggcagccagttgatcgag
gccagtgccggtaccggcaagaccttcaccatctccgcgctctacttgcgcctggtgctg
ggccatggcggtgaggcggcgggtttcgggcgtgaattgctgccgccgcagatactggtg
gtgacctttaccgatgccgccaccaaggaattgcgcgagcgcattcgcacgcgcctggcg
gaggccgcgcgcttctttcgcgatgaaaccagcgcccccgatggcctgatcgtcgagttg
cgtgagcaataccccgtcgagcagtgggccgcctgtgccaatcgcctggacatcgccgcg
caatggatggatgaggccgcggtctcgaccatccacagttggtgccagcgcatgttgcgc
gaacatgcgttcgacagcggcagcctgttcacccagaccctggaaaccgaccacagcgac
ctgctgggccaggttctgcgcgattactggcggctgttctgctacccgatgcagggtgat
gccctgaactgggtgcgcagccattgggtcgggccggccgaactcatgccccgggtgcgg
gcaatgttcggcaacgagcgtcgggacccacccgagcagacgccgagcgagttgatcgaa
gcctgcctgcaagaacgtcgtgaagccctggtgcagatcaaggcgccctggcgcgagtgg
gccgcgcaactgcgggagatctgcctgcaaggcgtggccagcaagagcgtcgacgggcgc
aagatgcaggcccggttcttcgagccctggttcgaaaagatcagtgcctgggccgaggac
gaatccgtcgagcaactggacatcggcaccggcttcacccgcctgacccccgaaggtatg
agcgaggcctggaaaggcgcggcccccgatcaccccgggctcgacgccatggccgtgctc
aaggccagcctcgatgccttgcccagcccggatgcggcggtcctgcaacacgccgcgcaa
tgggtgggggcacgtttcgaagaagagaagcggcggcgcgccgagatgggcttcgacgac
atgctgctgcgcctggacagcgccctgcagagcgatggcggcgagcgcctggcgaccctg
atccgcgagcagttcccggtggccctgatcgacgaattccaggacaccgacccggtgcag
taccggatcttcgaaagcatctaccggatcgaggccaacgaccccgagaccggcctgttc
ctgatcggcgatcccaagcaggcgatctacgccttccgtggcgccgatatctacacctac
ctgcgggcacgccaggccaccagcgggcgcctgcacaccctgggtaccaacttccgctcc
agccaggccatggtcagcgcggtcaaccatgtgttcctgcaagccgaacagcggccgcag
ggacagggagccttcctgtttcgcgaagcggatggcgagaacccggtgccattcctggcg
gtggccgcccaggggcgcaaggagcaactgctggtcgacggccagccggtgccggcactt
aacttctggcaattgccttcggaacagccgctgtccggggcccagtatcgccagcatcag
gcggcggcttgcgccactgcgattgtcggcctgctcaatggcggccagcaggggcgcagt
gggtttgtccgtgagcagcaagcgctgaaaggcttgctgccggcggatatcgcgatcctg
gtgcgcgatggcaaggaggcccaggccgtgcgcggcgagctggccgcccgcggggtgcgc
agtgtgtacctgtcggacaaggactcggtgttcgccgcccaggaagcccgggatgtgctg
gtgtggctcaaggcttgcgccgagccggacgtggagcggccgctgcgcgcggccctggcg
tccctgaccctgaacctgccgctgctggagctggagcggcttaaccaggatgaactggcc
tgggaagcgcgggtcatgcagttccgtggctaccgggcgatctggcgcagccagggcgtg
ctgccgatgttgcggcgcctgctgcatgacttccagctgccccaggcgctgatggcccgc
agtgatggcgagcgggtgctgaccaaccttctgcacctgtccgagctgctgcaacaaagc
gccgccgaactcgacggcgagcaggccctgatccgccatctggccgagcacctggcgctg
tccgggcaggcaggggaggagcagatcctgcgcctggaaagcgatgagcaactggtcaag
gtggtgaccatccacaagtccaagggcctggaataccccttggtgctcctgcccttcatc
tgttccaccaagccggtggatggcagccgcttgccgctgcattaccacgatgctgccggc
aagccccaggtcagcctacggcccaccccggagctgattgccctggccgatgaagagcgc
ctggcggaagacctgcggctgctctatgtggccctgacccgggcccagcatgcctgctgg
ctgggggtggccgatctcaagcggggcaatcacagcagctcggtgttgcacctttcggcc
ctgggttacctgctgggcggcggcgatgtcctgggcgaatccagcgccttgttgcgctgg
ctgctggacctgcagcagggctgcgctgcgattggcgtgtccgagctgcccgtcgtcgat
gaccagcgctatcagccaccgcgcaacgaggccaccctgctggcgccgctgacgcccagc
cgtcgcgccgcggaaaactggtggattgcctcctacagtgccttgcgcatcagcgacatc
ctgggggcgggcagcaccgaggcgccggaaaacccccaggcgcagaaactcttcgacgac
gaacgcctggaccccgaagctcctcgggaaaccctggccagcggcggcgatatccaccgc
ttcccccgcggcccgaaccccgggaccttccttcatggcctgctggagtgggccggggag
gaggcttttgccgctgcccccgaggcgatcgaggacgccgtggcccggcgctgcaatcgc
cgcggctggcaaggctggatcccgaccctgagcgactggctgcagcacctgctgcaagcg
cccttgcccctgggcgagggccaggcaccggtggtgctcgggcagttgacccagtaccgg
gtcgagatggagttctggttcgccagccacaaggtcgatgtgctcaagctcgatgagcgg
gtacgccagcaaacccatcagggcgcgccccgagtcacggccgagccggtattgctcaac
ggcatgttcaagggctttatcgacctgaccttcgagcaccagggccgctattacgtggcc
gactacaaatccaactggctgggcgcggacgacgcggcctacaccgagcaggccatggaa
caatcgattctcgacaaccgttacgacctgcaatacgtgctgtacctgctggccctgcac
cggcaattgaaggcccggctggcggactacgactacgatcgccatgtgggcggcgccttg
tacctgttcctgcggggcacccgtgccgccagccagggggcctacttcgcccggccgcct
cgacagttgatcgagcaactggaccgcatgttccagggccagcccgagccacccaaggcc
gagcccgcctgggagcagggagtgctgctatga

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