KEGG   Pseudomonas protegens CHA0: PFLCHA0_c15720
Entry
PFLCHA0_c15720    CDS       T02671                                 
Symbol
algT
Name
(GenBank) putative RNA polymerase sigma-H factor AlgT
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
pprc  Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:pprc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pprc03021]
    PFLCHA0_c15720 (algT)
Transcription machinery [BR:pprc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PFLCHA0_c15720 (algT)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_IclR
Other DBs
NCBI-ProteinID: AGL83360
UniProt: A0A2C9EI85
Position
1750294..1750908
AA seq 204 aa
MAAADDTQLLERLLAGEQKAYKELVGTYQSAMRAVAYAIVGNRHADEVVQDAWLSVVRNL
AGFQGRSSLKTWLLTITANAAKSRYKQNRREVLLDDLPAPHGTVGDERFSSSDGHWLVAP
FAWHEDTPEALLTESELRDCLEHTLLSLSELQSSVLLLRERQGLELEEICNLLGLTLSNV
RVLLHRARLKVFATVEHFEETGQC
NT seq 615 nt   +upstreamnt  +downstreamnt
atggccgctgctgatgacacgcaactgctagagcgcctgttggcgggcgaacaaaaggct
tacaaggaactggtcggcacctaccagagcgccatgcgcgccgtggcctacgccattgtc
ggcaaccgccacgccgacgaagtggtacaggacgcctggctgtcggtggtgcgcaacctg
gcgggtttccaggggcgttccagcctcaagacctggctgctgaccatcaccgccaacgcg
gccaagagccgctacaagcagaaccgccgggaagtgttgctcgacgatctgccggcgccc
catggcaccgtgggtgatgagcgtttctcctccagcgatggtcactggctggtggcgcct
ttcgcctggcacgaagacaccccggaagccctgctgaccgagtccgaactgcgtgactgc
ctggagcacaccctgctcagcctgtcggagttgcagagcagtgtcctgctgttgcgcgaa
cgccagggcctggagctggaagagatctgtaaccttttggggctcacgctctccaatgtc
cgggtactgctgcaccgggcgcgtctgaaggtcttcgccaccgtggagcattttgaggaa
accggccaatgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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