KEGG   Pseudomonas protegens CHA0: PFLCHA0_c34460
Entry
PFLCHA0_c34460    CDS       T02671                                 
Name
(GenBank) TOP1E: DNA topoisomerase 1B
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pprc  Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:pprc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pprc03032]
    PFLCHA0_c34460
   03400 DNA repair and recombination proteins [BR:pprc03400]
    PFLCHA0_c34460
Enzymes [BR:pprc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     PFLCHA0_c34460
DNA replication proteins [BR:pprc03032]
 Prokaryotic type
  DNA Topoisomerases
   PFLCHA0_c34460
DNA repair and recombination proteins [BR:pprc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PFLCHA0_c34460
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AGL85216
UniProt: A0A2C9ENG9
Position
3854894..3855931
AA seq 345 aa
MPDACDTPALPADLHYTDDRQPGIRRRKLRGKFVYYDAQGQRLTQAAEVQRINALAIPPA
YAEVWICPDPKGHLQATGRDARGRKQYRYHPRWREVRDGDKYARLLAFGNALPKLRRQLQ
AQLAVPGFSREKVMATLILLLDETLIRVGNSQYARDNRSYGLTTLRNRHVQVSGSAIHFQ
FRGKSGVEHQITVKDPRLARVVKRCLELPGQQLFQYLDEDGQRHHVSSSDINACLQQLTG
ADFTAKDYRTWAGSVLALERLRQQPWEPQAEAKKHIVATVKEVARELGNTPAVCRKCYIH
PALLERFVLGELAQLPKARARQGLKAEEAGLANFLRRLAKEAQPA
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgcccgacgcttgcgatacccccgccctgcccgccgacctgcactacaccgacgaccgc
cagccgggcatccggcggcgcaagctgcggggcaagttcgtctactacgacgcccagggc
cagcgcctcacccaggccgccgaggtacagcggatcaacgctctggcgattcccccggcc
tacgcagaggtgtggatctgccccgaccccaaaggccatctgcaggccaccggccgcgac
gcaaggggccgcaagcagtaccgctaccacccgcgttggcgcgaagtgcgcgacggtgac
aagtacgcccgcctgctggcgttcggcaacgccttgcccaagctgcgccggcagttgcag
gcgcaattggcggtgcccggcttcagccgggaaaaggtcatggccaccttgatcctgctg
ctggatgaaaccctcatccgcgtgggcaacagccagtatgcccgggacaatcgctcctac
ggcctgaccacgttgcgcaaccgccatgtacaggtcagcggcagcgccatccacttccag
ttccgtggcaagagcggggtcgagcaccagatcaccgtcaaggacccgcgcctggcacgg
gtggtcaagcgctgcctggagttgcctgggcagcagctgttccagtacctggacgaagac
ggtcaacggcaccacgtcagctcgtcggacatcaacgcctgcctccagcaactgaccgga
gccgacttcaccgccaaggactaccgcacctgggccggcagcgtcctggccctggagcgg
ttgcgccagcagccttgggagccccaggccgaggcgaagaaacacatagtggcaacggtc
aaggaagtggcccgggaactgggtaacactccggcagtgtgccgcaagtgctacatccat
ccggcgctgctggaacgcttcgtcctcggtgagttggcgcagttgcccaaggcccgggcc
cgccagggcctgaaggccgaggaagcgggcctggcgaactttctgcggcgcctggcgaag
gaggcccaaccggcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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