KEGG   Pseudomonas protegens Cab57: PPC_1302
Entry
PPC_1302          CDS       T03613                                 
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
ppro  Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppro03009]
    PPC_1302 (rimO)
Enzymes [BR:ppro01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     PPC_1302 (rimO)
Ribosome biogenesis [BR:ppro03009]
 Prokaryotic type
  ribosomal protein modification factors
   PPC_1302 (rimO)
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 TRAM CLP1_P
Other DBs
NCBI-ProteinID: BAO60649
Position
complement(1443530..1444867)
AA seq 445 aa
MSTPSAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVNAVHEVVP
PKQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPE
LIIRSTFIVGFPGETEEDFQYLLNWLTEAQLDRVGCFQYSPVEGAPANDLDLEVVPDEVK
QDRWERFMAHQQEISSARLQQRIGKEIEVLIDEVDENGAVGRCFFDAPEIDGNVFIDGAG
DLKPGDKVWCRVTDADEYDLWAETL
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtccaccccctccgcgccggccaacccgaaagtcggcttcgtatccctgggttgccca
aaagctctggtcgactccgagcgcatcctcactcaactgcgcatggaaggctatgacgtg
gtctccacctaccaggacgccgacgtcgtggtggtcaacacctgcggtttcatcgactcg
gccaaggccgaatccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtcaccggctgcatgggtgtggaagaaggcaatatccgtgacgtgcaccctagcgtgctg
gcggtcaccggcccgcagcagtacgagcaagtggtcaacgccgtgcacgaagtggtgcca
ccgaaacaggaccacaacccgctgatcgacctggtgccgccgcaaggcatcaagctgacc
ccgcggcactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtcagccgcccagtgggcgatgtgctcgacgaa
gcccagcgcctggtcaagtccggggtcaaggaactgctggtgatctcccaggacaccagc
gcctatggcgtcgacgtcaagtaccgcaccggcttctggaacggcgcgccggtgaagacc
cgcatgaccgagctctgcgaagccctgagcaccctgggcgtatgggttcgcctgcactac
gtgtacccctacccgcacgtggacgagctgattccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcatgccagcccgaaagtgctcaaggccatgaagcgc
ccagccttcgaagacaagaccctggcgcgaatcaagaactggcgcgagatctgccccgaa
ctgatcatccgttcgacctttatcgtcggcttcccgggcgaaaccgaagaagacttccag
tacctgctgaactggctgaccgaagcccaactggaccgcgtcggctgcttccagtactcg
ccggtggaaggcgctccggccaacgacctggacctggaagtggtcccggacgaggtcaag
caggaccgttgggagcgattcatggcgcaccagcaggaaatcagctcggcacgcctgcaa
cagcgcatcggcaaggaaatcgaagtgctgatcgatgaagtcgacgagaatggcgccgtg
ggccgctgcttcttcgatgccccggaaatcgacggcaatgtgttcatcgacggcgcgggt
gacctgaagccgggcgacaaggtctggtgccgggtgaccgacgccgacgaatacgacctc
tgggccgaaaccctgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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