KEGG T03613: PPC

Pseudomonas protegens Cab57: PPC_2776

Entry

PPC_2776          CDS       T03613

Name

(GenBank) exonuclease SbcC

K03546

DNA repair protein SbcC/Rad50

Organism

ppro Pseudomonas protegens Cab57

Brite

KEGG Orthology (KO) [BR:ppro00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppro03400]
    PPC_2776
DNA repair and recombination proteins [BR:ppro03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PPC_2776
    Archaeal homologous recombinant proteins
     PPC_2776

SSDB

Motif

Pfam:

AAA_23 SbcC_Walker_B AAA_21 AAA_29 SMC_N ABC_tran cobW RsgA_GTPase AAA_22 MMR_HSR1 nSTAND3 AAA_25

Other DBs

NCBI-ProteinID:

BAO62123

Position

complement(3031482..3035126)

AA seq 1214 aa
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNIGRETKVPEVDSEILTSDPRTLLRRGTGSGYAEVDFVGIDGRRYRARWETNRARDKA
TGKLQGSRQNLTDLDSEQLLSNQSKSEYKQLIEARLGLNFEQFTRAVMLAQSEFSAFLKA
DDKERSELLEKLTNTAVYSQLGRRAYSKSKEAEDAHKELKAQASGISPLEPEARAELEQQ
LSQAQQQLKEQQAQLRQLEAQHVWLKELRQWQEARQSAAEQLQAAEQDAQALAPERLRLQ
RLEQLAPQRHQFLRQAELGASLPPLRQQIQQQVEQQGALQQQQERLQQQLQDAGTALSQA
QEQHSTSAPLLREAFAEQANLERLGQSLAQAEAQRSRAEQASTEGQQGIQQLLEKQRLVG
ERLERIAGQLAHSVALAPLSDAWNAYRERLQQLMLIGNRLHQGQAELPALEQRASSAAQQ
LSEQRTQLELLYSEAGAEPQAVAEQIQLLGTLLQDNRKQQRAVEELARLWAQQRELDQRG
QALQDRQQAVAAQREELNKVGLQAKAELVVAEQTLSVTQALLERQRLARSASVEELRGQL
QSDQPCPVCGSVEHPYHQPEALLQSLGRHDENEEASARKTVDSLKEQLNELRAQVQGLIA
QQKEFLQQQEQLASQQQALAPSLQAHPLSASLLDQDPPKRDAWLQQQLAQLQQSITQDEN
RQGVLLTLQKDAARLQNQLQAAIDASQQAAQHLDKQQQQLSADRQRLDEELASFSHLLPA
EVLDGLRRDPASTFMQLDQQVLQRIEQLREQQEEAEEQQQRQLTLEKEQDRQLTRQQQLA
EAQQQFDTLHQQQQACQHRLAELLGQQPSAEHWQQHLEQAVDQARSALALAQQQQQALHQ
QAIELGAELKAREERLQALESEQQQLAASIEQWRAGHPELDDAGLQQLLELDEEQVQQLR
QRLQDNDKAIEQAKVLLQERQQRLEQHQAQHNGNLETEQLAQALEQLQQQAQASEQQVAD
LRARQSEDQRRQAANQALNQRLEQAYAQWQRWARLSALIGSAEGDKFRKIAQAYNLDLLV
HHANAQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLAS
MASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIK
VSRQGNGLSTLEVK

NT seq 3645 nt +upstreamnt +downstreamnt
atgaagatcctggccatccgcctgaagaacctggcctccctggccggccccttcgagatc
gacttcaccgccgagcccctggccagcgccgggctgttcgccattaccgggcccaccggc
gccggcaagagcaccctgctggatgccctgtgcctggcgctgttcggcgcggtgccgcgg
ctgaacaatatcggccgcgagaccaaggtccccgaggtcgacagcgagatcctcaccagc
gacccgcgcaccctgctgcgccgcggcaccggcagcggctatgccgaggtggactttgtc
ggcatcgacggccgtcgctaccgcgcccgctgggaaaccaaccgcgcccgcgacaaagcc
accggcaagctgcaaggcagccggcagaacctcactgaccttgacagcgaacagctgctg
agcaaccagagcaagagcgaatacaagcaactgatcgaggcccgcctggggctcaacttc
gaacagttcacccgggcggtgatgctggcccagagcgagttcagcgcctttctcaaggcc
gacgacaaggaacgcagcgagctgctggaaaagctcaccaacactgcggtctacagccag
ttggggcgccgcgcctacagcaagagcaaggaggccgaagacgcccacaaggagctcaag
gcccaggccagcggcatcagcccgctggagcccgaggcccgggccgagcttgaacagcag
ttgagccaggcccagcaacagctcaaggagcaacaggcccagctcaggcagttggaagcc
cagcacgtctggctcaaggaactgcgccaatggcaggaagcccggcagagcgccgccgaa
caactgcaagcggccgaacaggacgcccaggccctggccccggagcgcctgcgcctgcaa
cgcctggagcaactggcgccgcagcggcaccagttcctgcgccaggcagagctgggcgcc
agcctgccgccgttgcgccagcagatccagcagcaggtcgaacagcaaggcgccctgcaa
caacagcaggaacgcctgcaacagcaactgcaggacgccggcacggccctgtcccaggcc
caggaacagcacagcaccagcgccccgttgctgcgcgaagcctttgccgaacaggccaac
ctggagcgcctggggcagagcctggcccaggccgaggcccaacgcagccgcgccgagcag
gccagcaccgaaggccagcaaggcatccagcaactgctggaaaaacagcgcctggtgggc
gaacgcctggagcggatcgccgggcaactggcccacagcgtcgccctcgcccccttgagc
gacgcctggaacgcctaccgcgaacgcctgcaacagctgatgctgatcggcaatcgcctg
caccagggccaggccgaactgccggccctggaacagcgcgccagcagcgccgcccagcaa
ctgagcgagcaacgcacgcagctcgaactgctctacagcgaagccggggccgagccccag
gcggtggccgagcagatccagttgctcggcaccctgctccaggacaaccgcaagcagcag
cgcgccgtcgaagagctggcccggctctgggcccagcaacgcgaactggaccagcgcggc
caggccctgcaggacaggcagcaggcggtggccgcccagcgcgaggagctgaacaaggtc
ggcctgcaggcgaaggccgagctggtggtggccgagcagaccctgagcgtcacccaggcc
ctgctggagcgccagcggctggcccgcagcgccagcgtcgaggagttgcgcgggcaattg
cagagcgaccagccgtgcccggtgtgcggcagcgtcgagcacccctaccaccagcctgaa
gccttgctgcagagcctcgggcgccacgacgagaacgaggaagccagcgcccgcaagacg
gtggacagcctcaaggaacagctcaacgaactgcgggcccaggtccaggggctgatcgcc
cagcagaaggaattcctccagcagcaggaacagctggcgagccagcagcaggccctggcc
ccgagcctgcaagcccaccccttgagcgccagcctcctggaccaggacccgcccaagcgc
gacgcctggctgcaacagcaactcgcccagctgcagcagagcatcacccaggacgaaaac
cgccagggcgtcctgctgaccctgcaaaaagatgccgcgcgcctgcaaaaccagctgcag
gcggcaatcgacgccagccagcaggccgcccagcacctggacaagcaacagcagcaactg
agcgccgaccgccagcgcctggacgaggaactggccagcttcagccacttgctgccggca
gaggtcctcgacggcctgcgccgcgacccggccagcaccttcatgcagctcgaccagcag
gtgctgcaacgcatcgagcaactgcgcgagcagcaggaagaggccgaagaacagcaacag
cgccagctgaccctggaaaaggaacaggaccgccagttgacccgccagcagcaactggcc
gaggcccaacagcagttcgacaccctgcaccagcagcaacaggcctgccagcacaggctc
gccgagctgctgggccagcagcccagcgccgagcactggcagcagcacctggagcaagcc
gtggaccaggcccgcagcgccctggccctggcccagcaacagcagcaggcactgcaccag
caagcgatcgagttgggcgccgagctcaaggcccgggaagaacgcctgcaagccctggaa
agcgaacaacagcaactggccgccagcatcgagcagtggcgcgccgggcacccggaactg
gatgacgccggcctgcaacagctgctggagctggacgaagaacaggtgcagcaactgcgc
cagcgcctgcaagacaacgacaaggccatcgagcaggccaaggtcctgctgcaggaacgc
cagcagcgcctggaacagcatcaggcccagcacaacggcaacctggaaaccgaacaactg
gcccaggccctggaacagctgcagcaacaggcccaggccagcgaacaacaggtggcggac
ctgcgtgcacggcaaagcgaggaccagcgccgccaggccgccaaccaggccctcaaccaa
cgccttgaacaggcctacgcccagtggcagcgctgggcccggctcagcgccctgatcggc
tcggccgaaggcgacaagttccgcaagatcgcccaggcctacaacctcgacctgctggtg
caccacgccaacgcccaactgcgccaactggtgcgccgctaccgcctcaagcgcggtggc
agcatgctcggcctgctggtgctggacaccgaaatgggcgacgaactacgctcggtgcac
tcgctgtccggcggcgaaaccttcctggtgtccctggccctggccctggggctggcctcc
atggcttccagcaccctgaagatcgaatcgctgttcatcgacgaaggcttcggcagcctc
gaccccgagtccctgcaactggccatggatgccctcgacggcctgcaggcccagggccgc
aaggtggcggtgatctcccacgtacaggaaatgcatgaacggattccggtacagatcaag
gtcagccgccagggcaatggcctgagcaccctggaggtgaaatga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (18)   

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