KEGG   Pseudomonas protegens Cab57: PPC_3992
Entry
PPC_3992          CDS       T03613                                 
Name
(GenBank) ycfD protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
ppro  Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppro03009]
    PPC_3992
Enzymes [BR:ppro01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     PPC_3992
Ribosome biogenesis [BR:ppro03009]
 Prokaryotic type
  ribosomal protein modification factors
   PPC_3992
SSDB
Motif
Pfam: JmjC_2 ROXA-like_wH AraC_binding Cupin_1 Asp_Arg_Hydrox
Other DBs
NCBI-ProteinID: BAO63339
Position
4419872..4421038
AA seq 388 aa
MNPDIPLQLLGGITAREFLRDYWQKKPLLIRQALPDFESPIEPDELAGLALEEEVESRLV
IENGERPWELRRGPFAEDEFSKLPERDWTLLVQAVDQFVPEVAELLEHFRFLPSWRIDDV
MISFAAPGGNVGPHFDNYDVFLLQGHGKRNWKIGQMCDSESPLLQHADLRILAEFEETES
WVLEPGDMLYLPPRLAHYGVAVNDCMTYSVGFRAPSAAEVLTHFTDFLGQFLPDEDRYTD
ADVQPASDPHQIQQDALDRLKGLLAEHMSDERLLLTWFGQFMTEPRYPELVTGPELEEED
LLGSLEQGAILIRNPSARLAWSEVDEDLLLFASGQSRLLPGKLRELLKMICAADALHIDN
LGQWLADDDGRGLLCELVKQGSLGFADE
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaatcctgatattcctcttcaacttctgggcggcatcactgcacgggaatttctgcgt
gactactggcagaagaaacccctgctgatccgtcaggccctgcctgacttcgaaagcccg
atcgaacctgacgaactggccggcctggccctggaagaagaagtcgaatcgcgcctggtg
atcgaaaacggcgagcgcccatgggaactgcgccgcggccccttcgccgaagacgagttc
agcaagctgccggaacgcgactggaccctgctggtccaggccgtggaccagttcgtcccg
gaagtcgccgagttgctggagcacttccgcttcctgccgagctggcgcatcgatgacgtg
atgatcagcttcgccgcacctggcggtaacgtcggcccgcacttcgacaactacgacgtg
ttcctgctgcaaggccacggcaagcgcaactggaagatcggccagatgtgcgactccgaa
agcccgctgctgcagcacgcagacctgcgcatcctcgccgaattcgaagaaaccgaaagc
tgggtcctggagcccggcgacatgctctatctgccaccgcgcctggcccactatggcgtt
gcggtgaatgattgcatgacctattcggtcggtttccgcgccccgagcgccgccgaagtc
ctgacccacttcaccgacttcctcggccagttcctgccggacgaagaccgctacaccgac
gccgacgtgcagccggccagcgacccgcaccagatccagcaggacgccctcgaccggctc
aagggcctgctggccgagcacatgagcgatgaacgcctgctgctgacctggttcggccag
ttcatgaccgaaccacgctacccggaactggtgaccggacccgaactggaagaagaagac
ctgctgggcagcctggaacagggcgcgatcctgatccgcaacccgagcgcgcgcctggcc
tggtcggaagtggatgaagacctgctactgttcgccagcggccaaagccgtctgcttccc
ggtaagctgcgcgaactgctgaaaatgatttgcgccgccgatgccctgcatatcgacaac
ctcggccagtggctggcggatgacgatgggcgcggcctgttgtgtgaactggtcaagcaa
gggagcctggggtttgccgatgaataa

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