KEGG   Pseudomonas protegens Cab57: PPC_5276
Entry
PPC_5276          CDS       T03613                                 
Symbol
psoR
Name
(GenBank) LuxR family transcriptional regulator
  KO
K07782  LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
ppro  Pseudomonas protegens Cab57
Pathway
ppro02020  Two-component system
ppro02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PPC_5276 (psoR)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PPC_5276 (psoR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppro03000]
    PPC_5276 (psoR)
Transcription factors [BR:ppro03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    PPC_5276 (psoR)
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4_2 Sigma70_r4 HTH_20 HTH_38 HTH_23 HTH_40 HTH_28
Other DBs
NCBI-ProteinID: BAO64623
Position
complement(5847681..5848439)
AA seq 252 aa
MQSRLAEFDTYLLSGNSLHERMTGTMTLASELGFDALVYDYSPVPFDQAGELIIPSAMVC
NTPRDWLELWCDQGYYHIDPVQQVALDSSSPFIWSYKPEAETVLRQALGQQHAPVSSYLH
HHQMAHGMTVPIHLPRGGFASLTGLRSGNATVALQDLQQVQGHFTLLAHALQEHLYPQLS
KCVRSYPVDLTRRERECLKWAAEGMTSGEIAERLQRSQATINLHLTSAMHKLGARNRVQA
VVRAVHYRLLGN
NT seq 759 nt   +upstreamnt  +downstreamnt
atgcagagcaggctcgcggaatttgatacctatcttttgtccggaaactcgctgcatgag
cgaatgacgggaaccatgacactggcctcggaactgggtttcgatgccctggtttatgac
tacagcccggtgcctttcgatcaggcaggcgagctgatcatccccagtgccatggtctgc
aatacccccagggactggctggagctctggtgcgatcagggttactaccatatcgacccg
gtccagcaggttgctctggacagctcctcgccctttatctggtcctacaagcccgaggcg
gaaaccgtcctgcgccaggccctcgggcagcagcacgctccggtatccagttacctgcac
catcatcaaatggcccacggcatgaccgtgcccatccatttacccaggggcggtttcgcc
agcctcaccggtttgcgctccggcaatgccacggtggcattacaggacttgcaacaggtt
cagggccacttcaccctgcttgctcatgcgttgcaggagcatctctatccacagctcagc
aaatgcgttcgcagttatccggttgatctgacccggcgtgaacgcgagtgcctgaaatgg
gcagcagagggcatgacttccggcgagattgccgagcgcctgcagcgttcgcaggccacg
atcaacctgcacctgacctcggcgatgcacaagctgggcgccaggaatcgggttcaggcg
gtggttcgcgcggttcactatcgcctgctgggtaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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