KEGG   Pseudomonas protegens Cab57: PPC_5584
Entry
PPC_5584          CDS       T03613                                 
Name
(GenBank) extracellular solute-binding protein
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
ppro  Pseudomonas protegens Cab57
Pathway
ppro02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PPC_5584
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppro02000]
    PPC_5584
Transporters [BR:ppro02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    PPC_5584
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_6
Other DBs
NCBI-ProteinID: BAO64931
Position
complement(6176675..6177718)
AA seq 347 aa
MLRSLKFTALALGMMGAAHAMAAGPDLTVVSFGGANKAAQVKAFYAPWEAAGKGKIIAGE
YNGEMAKIKAMVDTKSVSWDLVEVESPELSRGCDEDMFEQLDPALFGNSEDYVKGAIQPC
GVGFFVWSTVLAYNADKLKTAPSSWADFWDVKQFPGKRGLRKGAKYTLEFALMADGVAPK
DVYKVLAGKDGQDRAFKKLDELKPYIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKE
SNLKVVWNGGIYDFDAWAIPKGLDKARAEAAKKFIAYSVQPQQQKTYSENIAYGPANTQA
VPLLAKDILKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNAWAAK
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgttgagatccctgaaattcaccgccctggcactgggcatgatgggtgcggcgcacgcc
atggcggcgggcccggacctgaccgtggtgtcctttggcggggcgaacaaggcggcccag
gtcaaggccttctatgccccttgggaagcggcgggcaagggcaagatcatcgccggcgaa
tacaacggcgagatggccaagatcaaggccatggtcgacaccaagagcgtgtcctgggac
ctggtagaagtggagtccccggaactgtcccgcggttgcgacgaggacatgttcgagcaa
ctggacccggcgctgttcggtaacagcgaagactacgtcaagggcgcgatccagccgtgc
ggcgtgggttttttcgtctggtccacggtactggcctacaacgccgacaagctgaaaacc
gctccgagcagttgggctgatttctgggacgtcaagcagttcccgggcaagcgcggcctg
cgcaagggcgccaagtacaccctggagttcgccctgatggccgacggcgtcgcgcccaag
gacgtgtacaaggtcctggccggcaaggatgggcaggaccgtgccttcaagaaactcgat
gagctcaagccctacattcagtggtgggaagccggcgcccagccgccgcagtacctggct
tccggcgacgtggtcatgagctcggcctacaacggccggatcgccgcggtgcagaaggaa
agcaacctgaaagtggtgtggaacggcggcatctacgacttcgacgcctgggccattcca
aaaggcctggacaaggctcgcgccgaagcggcgaagaagttcatcgcctactcggtgcaa
ccgcagcagcagaagacctattcggagaatatcgcctacggcccggccaacactcaggcc
gtgccgctgctggccaaggacatcctcaaggacatgccgaccactccggaaaacatcgcc
aaccaggtgcagatcgacgtcagcttctgggctgacaacggtgagcaactggaacagcgc
ttcaacgcctgggcagccaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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