KEGG   Paroceanicella profunda: FDP22_05115
Entry
FDP22_05115       CDS       T06319                                 
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
ppru  Paroceanicella profunda
Pathway
ppru03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ppru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    FDP22_05115 (mutS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppru03400]
    FDP22_05115 (mutS)
DNA repair and recombination proteins [BR:ppru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     FDP22_05115 (mutS)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_27 AAA_29 AAA_23
Other DBs
NCBI-ProteinID: QDL91213
UniProt: A0A5B8FYH4
Position
complement(1132273..1134939)
AA seq 888 aa
MDDSTPDAPAAAVTPMMAQYLDLKGQYPDALLFYRMGDFYEMFFDDARAAAAALDIALTK
RGKHAGDDIPMCGVPVHAAEGYLLTLIRKGFRVAVCEQMEDPAEAKKRGAKSVVRRDVVR
LVTPGTLTEDTLLDARRHNYLAAWAEIRGEGALAWLDVSTGDFAATACPRPLLGPMLARL
APRELLCAQGADAPLREMVEESGGVLTELAGASFDSQSAEHRLKGLYAVSTLEAFGGFGR
AEIAALGAVVDYVEVTQKGKLPMIRPPQHEEAGGTMQIDAATRRNLEITRSLSGGREGAL
LQAVDRTVTGAGARLLEARLSSPSTDLDTIRARHDAVAHLIENRPRADALRARLRGVPDM
ERALTRLSLERGGPRDLAALRDGLAEGAGIAALLTGALPDALAEAAAALSGLEDITAPLE
AALVAEPPLLARDGGFIAAGHHADLDEVRRLRDEGRGVIASLQAGYAEATGIPSLKIKHN
NVLGYFIETTATHAEKMRRPPQSETFIHRQTTANQVRFTTVELSGLETRILNAGGRALEL
ERQLFEGLAAGVRACAARIAAAARALAGIDLACGFADLADAEDWVRPVMQAGGAFRIEGG
RHPVVEQALRRAGDKPFVANDCDLTLGEKPVWLVTGPNMAGKSTFLRQNALIALLAQAGA
FVPARAATIGIVTQLFSRVGAADDLARGRSTFMVEMVETAAILNQAGPGALVILDEIGRG
TATWDGLSIAWATLEHLHDANRCRTLFATHYHELTTLTARLSGLLNAAVTVREWQGDVIF
LHEVRPGAADRSYGVQVARLAGLPAAVIDRARHVLETLEEGDRAGGARAATLIDDLPLFS
VRPPAPAPARAAPSAVEARLREVLPDTLSPRDALDLIYELRDLLGPDT
NT seq 2667 nt   +upstreamnt  +downstreamnt
atggacgactccacacctgacgccccggccgccgccgtgaccccgatgatggcccagtac
ctggacctgaagggccagtacccggacgcgctgctgttctaccggatgggcgatttctac
gagatgttcttcgacgacgcccgcgcggcggcggcggcgctggacatcgccctcaccaaa
cgcggcaagcacgccggagacgacattcccatgtgcggcgtgccggtgcacgcggcggaa
ggctacctgctcaccctcatccgcaagggcttccgcgtcgcggtctgcgagcagatggag
gacccggcggaggcgaagaagcgcggcgcgaaatccgtggtcaggcgcgacgtggtgcgg
ctcgtcacccccggcaccctcaccgaggacacgctgctggacgcgcggcggcacaattac
ctcgccgcctgggcggagatccgcggcgagggggcgctggcctggctcgacgtctccacc
ggcgatttcgccgccaccgcctgcccgcgcccgctgctggggccgatgctggcccggctc
gccccgcgcgagctgctctgcgcccagggggccgatgcgccgttgcgcgagatggtggag
gagagcggcggcgtgctcaccgagctggccggcgccagcttcgacagccagtccgccgag
caccggctgaaggggctctacgccgtctccacgctggaggccttcggcgggttcggccgg
gcggagatcgcggcgctgggcgcggtggtggattacgtggaggtgacccagaagggcaag
ctcccgatgatccgcccgccgcagcacgaggaagccggcggcacgatgcagatcgacgcc
gccacccgccgcaacctggaaatcacccgcagcctgtccggcggccgcgagggcgcgctg
ctgcaggcggtggaccgcacggtgaccggcgccggcgcgcggctgctggaggcccggctc
tccagcccctcgaccgacctcgacaccatccgcgcccgccatgacgcggtggcgcatctc
atcgagaaccgcccgcgcgccgacgccctgcgcgcccggctgcgcggcgtgccggacatg
gagcgcgccctcacccggctgagcctggagcgcggtggcccgcgcgacctcgccgccctg
cgcgacgggctggccgagggcgccggcatcgccgccctgctcaccggtgcgctgccggac
gcgctcgccgaggccgccgccgccctcagcgggctggaggacatcaccgcgccgctggag
gccgcgctggtggccgaaccgccgctgctggcgcgcgacggcggcttcatcgccgccggc
caccatgcggatctggacgaggtgcgccgcctgcgcgacgagggccgcggcgtgatcgcc
tcgctgcaggccggctatgccgaggccaccggcatcccctcgctgaagatcaagcacaac
aacgtgctgggctatttcatcgagaccaccgccacccacgcggagaagatgcgcaggccg
ccgcagtccgagaccttcatccaccggcagaccacggcgaaccaggtgcgcttcaccacg
gtggagctttccggcctggaaacccgcatcctgaacgccggcgggcgggcgctggagctg
gagcgacagctgttcgaggggctggcagccggggtgcgcgcctgcgcggcccgcatcgcc
gccgccgcgcgggcgctggcgggcatcgacctggcctgcggcttcgccgatctggccgac
gcggaggactgggtgcgcccggtgatgcaggccggcggcgccttccgcatcgagggcggc
cgccacccggtggtggaacaggcgctgcgccgggccggcgacaagcccttcgtggccaat
gactgcgacctgacgctgggcgagaagccggtctggctggtgaccgggccgaacatggcc
ggcaaatccaccttcctgcgccagaacgcgctcatcgcgctgctggcgcaggccggggcc
ttcgttccggcgcgcgcggcgacgataggcatcgtcacccagctgttctcgcgcgtgggc
gcggcggacgacctggcccgcggccgctccaccttcatggtggagatggtcgaaaccgcg
gcgatcctgaaccaggccggccccggcgcgctggtgatcctcgacgagatcggccgtggc
accgccacctgggacgggctgtccatcgcctgggccacactggagcacctgcatgacgcg
aaccgctgccgcacgctgtttgccacgcattatcatgaacttaccacgctcacggcccgg
ctttccggcctgctgaacgccgccgtcacggtgcgtgagtggcagggagacgtgatcttc
ctgcacgaggtgcgccccggcgccgccgaccgctcctacggggtgcaggtggcccggctg
gccgggctgccggccgcggtgatcgaccgcgcgcgccacgttctggaaaccctggaggag
ggtgaccgcgcgggcggggcgcgggccgcgacgctgatcgacgacctgccgctgttctcc
gtccggccgccggcgccggccccggccagggccgcgccctcggcggtggaagcccggctg
cgcgaggtgctgccggacacgctctcgccccgggacgcgctcgacctcatctacgaattg
cgcgacctgctcggccccgatacctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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