KEGG   Paroceanicella profunda: FDP22_21615
Entry
FDP22_21615       CDS       T06319                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
ppru  Paroceanicella profunda
Pathway
ppru01501  beta-Lactam resistance
ppru01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:ppru00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    FDP22_21615
   01503 Cationic antimicrobial peptide (CAMP) resistance
    FDP22_21615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ppru03036]
    FDP22_21615
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppru02000]
    FDP22_21615
   01504 Antimicrobial resistance genes [BR:ppru01504]
    FDP22_21615
Chromosome and associated proteins [BR:ppru03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    FDP22_21615
Transporters [BR:ppru02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   FDP22_21615
Antimicrobial resistance genes [BR:ppru01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    FDP22_21615
SSDB
Motif
Pfam: HlyD_D23 HlyD_3 Biotin_lipoyl_2 CusB_dom_1 OEP
Other DBs
NCBI-ProteinID: QDL94467
UniProt: A0A5B8FJI2
Position
pD4M1B:219628..220983
AA seq 451 aa
MHTRMYVAAHSEAELACRLAECFVPSPFPGIAIRRLPDMQDYFRSRFALASLMVLVVAGC
REDDNAAQGGQGQRPPSQVAVITTKGETIPFQSELPGRVAPTRIAEVRPRVGGIILERVF
EQGATVAAGDPLFRIDPATYEVALESAKASLARAEATQLQAQQDQDRASALVGSNAVSRS
AYDNAVAGLAQAKADVASAVAQVRQAQLNLDYTTVTAPISGRIGRAQVTEGALVSANNAE
ELATIQQLDPVYADFQQPVSQLIELQEALRDGSLQEVEPNAARVVLVRDDGSVYKHAGKL
LFSETTVDPTSGQVLLRCEFPNPDLSLLPGMYVRVRIEQGIQGGAIAIPNQAIQRDASGR
SLVYVVGSDDKLALRPVITSRVIEDRTVIDQGLQPGERVVVDGFQKIGPGAPVQTTEWVN
PLTKDTAAAAEGSGDAGQATKSAPASATSTD
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcatacacgtatgtatgttgcagcgcacagtgaggcggagcttgcctgccgccttgcc
gagtgtttcgttccttccccgttcccgggcattgcaattcgcaggcttccagacatgcaa
gattatttccgctcccgttttgcccttgcgtccctgatggtcctggtggtcgcgggatgt
cgcgaggatgacaatgccgcgcagggtggacagggccagcggccgccctcccaggttgcg
gtcatcaccacgaagggcgagaccatccccttccagtccgagcttccgggccgcgtcgcc
ccgacccgtatcgccgaggtccgcccccgggtgggcgggatcatcctggagcgcgtgttc
gagcagggcgcgaccgtcgcggccggcgacccgctgttccgcatcgatccggccacctac
gaggtggcgctcgaatccgccaaggccagcctggcccgtgccgaggccacccagctccag
gcccagcaggaccaggaccgcgccagcgccctcgtgggcagcaacgcggtgagccggtcg
gcctatgacaacgccgtcgccgggctggcccaggccaaggccgatgtcgcctccgccgtg
gcgcaggtgcgccaggcccagctcaacctcgactacaccacggtcaccgcgccgatctcg
ggccgcatcggccgcgcgcaggtgacggagggggcgctcgtctcggccaacaacgccgag
gaactggccaccatccagcagctcgacccggtttacgccgacttccagcagccggtgtcc
cagctcatcgagctgcaggaagccctgcgcgacggatcgctgcaggaggtggagccgaac
gcggcccgggtggttctggtgcgggacgacggctccgtctacaagcatgccggcaagctg
ctgttctcggaaaccacggtggacccgacctccggtcaggttctgctgcgctgcgaattc
cccaaccccgacctctcgctgctgccgggcatgtatgtgcgcgtgcgcatcgaacagggc
atccagggcggtgccatcgcgatccccaaccaggcgatccagcgtgacgccagcggccgc
tcgctggtctacgtggtcggcagcgacgacaagctggccctgcgcccggtcatcacctcg
cgggtcatcgaggaccgcacggtgatcgaccagggcctccagccgggcgagcgcgtggtg
gtcgacggcttccagaagatcggaccgggcgccccggtgcagacgactgagtgggtgaac
ccgctcacgaaggacaccgcggctgcggccgaggggtccggcgacgcaggacaggccacg
aaatcggcccccgccagcgccacaagcaccgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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