KEGG   Pan paniscus (bonobo): 100987242
Entry
100987242         CDS       T02283                                 
Symbol
DDX60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
  KO
K20103  ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
Organism
pps  Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:pps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pps03019]
    100987242 (DDX60)
Enzymes [BR:pps01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100987242 (DDX60)
Messenger RNA biogenesis [BR:pps03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     100987242 (DDX60)
SSDB
Motif
Pfam: DEAD ResIII Helicase_C
Other DBs
NCBI-GeneID: 100987242
NCBI-ProteinID: XP_014200271
Position
4:complement(160376930..160532561)
AA seq 1712 aa
MERNVLTTFSQKMSQFILNEMPKAEYSSLFNDFVESEFFLIDGDSLLITCICEISFKPGQ
NLHFFYLVERYLVDLISKGGQFTIVFFKDAEYAYFNFPELLSLRTALILHLQKNTTIDVQ
TTFSRCLSKEWGSFLEESYPYFLIVADEGLNDLQTQLFNFLIIHSWARKVNVVLSSGQES
DVLRLYAYLLPSMYRHQIFSWENKQNIKDAYTTLLNQLERFKLSALAPLFGSLKWNNITE
EAHETVSLLTQVWPEGSDIRRVFCVTSCSLSLRMYRRFLGNREPSSGQETEIQQVNSNCL
TLQEMEDLCKLHCLTVVFLLHLPLSQRACARVITSHWAEDMKPLLQMKKWCEYFILRNIH
TFEFWNLNLIHLSDLNDELLLKNIAFYYENENVKGLHLNLGDTIMKDYEYLWNTVSKLVR
DFEVGQPFPLRTTKVCFLEKKPSPIKDSSNEMVTNLGFIPTSSFVVDKFAGDILKDLPFL
KSDDPIVTSLVKQKEFDELVHWHSHKPLSDDYDRSRCQFDEKSRDPRVLRSVQKYHVFQR
FYGNSLETVSSKIIVTQTIKSKKDFSGPKSKKAHETKAEIITRENKKRLFAKEEQKEEQK
WNALSFSIEEQLKENLHSGIKSLEDFLKSCKSSSVKLQVEMVGLTACLKAWKEHCRSEEG
KTTKDLSIAVQMMKRIHSLMEKYSELLQEDDQQLIARCLKYLGFDELASSLHPTQDAEND
VKVKKRNKYSVGIGPARFQLQYMGHYLIRDERKDPDPRVQDFIPDTWQRELLDVVDKNES
AVIVAPTSSGKTYASYYCMEKVLKESDEGVVVYVAPTKALVNQVAATVQNRFTKNLPSGE
ALCGVFTREYRHDALNCQVLITVPACFEILLLAPHHQNWVKKIRYVIFDEVHCLGGEIGA
EIWEHLLVMIRCPFLALSATISNPEHLTEWLQSVKWYWKQEDKIIENNTASKRHVGRQAG
FPKDYLQVKQSYKVRLVLYGERYNDLEKHVCSIKHGDIHFDHFHPCAALTTDHIERYGFP
PDLTLSPRESIQLYDAMFQIWKSWPRAQELCPENFIHFNNKLVIKKMDARKYEESLKAEL
TSWIKNGNVEQARMVLQNLSPEADLSPENMITMFPLLVEKLRKMEKLPALFFLFKLGAVE
NAAESASTFLKKKQETKRPPKADKEAHVMANKLRKVKKSIEKQKIIDEKSQKKTRNVDQS
LIHEAEHDNLVKCLEKNLEIPQDCTYADQKAVDTETLQKVFGRVKFERKGEELKALAERG
IGYHHSAMSFKEKQLVEILFRKGYLRVVTATGTLALGVNMPCKSVVFAQNSVYLDALNYR
QMSGRAGRRGQDLMGDVYFFDIPFPKIGKLIKSNVPELRGQFPLSITLVLRLMLLASKGD
DPEDAKAKVLSVLKHSLLSFKQPRVMDMLKLYFLFSLQFLVKEGYLDQEGNPMGFAGLVS
HLHYHEPSNLVFVSFLVNGLFHDLCQPTRKGSKHFSQDVMEKLVLVLAHLFGRRYFPPKF
QDAHFEFYQSKVFLDDLPEDFSDALDEYNMKIMEDFTTFLRIVSKLADMNQEYQLPLSKI
KFTGKECEDSQLVSHLMSCKEGRVAISPFVCLSGNFDDDLLRLETPNHVTLGTIGVNRSQ
APVLLSQKFDNRGRKMSLNAYALDFYKHGSLIGLVQDNRMNEGDAYYLLKDFALTIKSIS
VSLRELCENEDDNVVLAFEQLSTTFWEKLNKV
NT seq 5139 nt   +upstreamnt  +downstreamnt
atggaaagaaatgttcttacaacattttcacagaaaatgtcccagttcattttgaatgaa
atgccaaaagctgaatattccagtttattcaatgattttgttgaatctgaattttttttg
attgatggggattcattacttatcacatgtatctgtgagatatcatttaagcctgggcag
aacctccatttcttctatctggttgaacgctatcttgtggatcttattagcaaaggagga
caattcaccatagttttcttcaaggatgccgagtatgcgtatttcaacttccctgaactt
ctttctttgagaactgctttaattcttcatcttcagaagaataccaccattgatgttcaa
acaacattttcgagatgcttatcaaaagagtggggaagtttcttggaagagagttaccca
tatttcctgatagttgcagacgaaggcctgaacgatctacaaacacagctttttaacttt
ttaatcattcattcttgggcaaggaaggtcaacgttgtactttcctcagggcaagaatct
gatgttcttcgcctttatgcatacctccttccaagcatgtacagacaccagattttttcc
tgggagaataagcagaacattaaagatgcttatacaaccctgcttaaccagttggaaaga
tttaagctttcagcattagcacctctttttggaagtttaaaatggaataatattacggaa
gaggcacacgagactgtatctctgcttacacaagtctggccagaaggatctgacattcgg
cgtgtcttttgtgttacttcatgctcattatctttgagaatgtaccgtcgctttttagga
aacagagagccctcctctggtcaggaaactgagatccaacaggtgaacagtaattgctta
accctgcaggagatggaagatttgtgtaaactgcattgtctcactgtggtttttctactc
catctgcctctttctcaaagagcttgtgctagagtcatcacttcccattgggctgaggac
atgaagcctttattacaaatgaaaaagtggtgtgaatatttcatcttaagaaatatacat
acttttgaattttggaatctgaatttaattcacctttctgacttaaatgatgagcttttg
ttgaagaatattgctttttactatgaaaatgaaaatgtaaaaggcctacatttgaatttg
ggagataccattatgaaagattatgaatatctctggaataccgtatcaaagttggtcaga
gactttgaggttggacagccatttcctctgagaacaacaaaagtttgttttcttgaaaag
aaaccatcaccaatcaaagacagctccaatgaaatggtgaccaatttgggttttattcca
acgtcatcttttgtggttgataaatttgctggagatattttgaaagatttgccttttcta
aagagtgatgatcctattgttacttcactggttaaacaaaaggaatttgatgaacttgtg
cactggcattctcataaacccctgagtgatgattatgacaggtccaggtgtcagtttgat
gaaaaatctagagaccctcgtgttcttagatctgtgcaaaagtatcatgttttccaacgg
ttttatgggaattcattagaaacagtctcttcgaaaatcatcgtgactcaaactattaag
tcaaagaaggattttagtgggcccaagagcaaaaaggcacacgagaccaaggctgaaata
attactagagagaataagaaaaggttatttgccaaggaagaacaaaaggaagagcaaaag
tggaatgctttgtcattttctattgaagagcaattgaaagaaaatttacactctggaata
aagagcctggaagattttttgaaatcctgtaaaagtagctctgtgaaacttcaggttgaa
atggtggggttaactgcttgcttgaaagcctggaaagaacattgccgaagtgaagaaggt
aaaaccacgaaagatttaagtatagctgttcaaatgatgaaaaggatccactccttgatg
gaaaaatactcagaacttttacaagaagatgatcagcaactcatagccagatgccttaag
tatttaggatttgatgagttggcaagttctttacatccaacccaggatgcagaaaatgat
gtaaaagtgaagaaaaggaataaatattcagttggcattgggccagctcggttccaactg
caatacatgggccattatttgatacgagatgagagaaaagacccagatcccagggtccag
gattttattcccgacacatggcagcgagagctccttgatgttgtggataagaatgagtca
gcagtgattgttgccccaacgtcctcaggcaaaacctatgcctcctactactgtatggag
aaagtgctgaaggagagcgacgagggggtggtcgtgtacgttgcacccacaaaggccctt
gttaatcaagtggcagcaactgttcagaatcgttttacgaaaaatctgccaagtggtgaa
gctctctgtggtgttttcaccagggagtatcgtcatgatgccttaaactgtcaggtactt
attacagtgcctgcctgctttgaaattctgctgcttgctcctcatcaccaaaactgggtg
aaaaagatcagatatgttatatttgatgaggttcattgtcttggtggagaaattggagca
gaaatctgggaacatctccttgtcatgatccgatgtccctttttggctctttcagctacc
ataagtaatcctgaacatctcaccgagtggctacaatcggtaaaatggtactggaaacaa
gaagacaaaataattgaaaataataccgcttctaaaagacatgtgggtcgtcaggccggc
tttcccaaagactacttgcaagtaaaacaatcgtataaagttagacttgtgctctatgga
gagaggtataatgatctagagaagcatgtatgttcaataaaacatggtgacattcatttt
gatcattttcacccatgtgctgcactaacaacagatcatattgaaaggtatggattccct
cctgatcttaccctttcacctcgagaaagcatccagctgtatgatgccatgtttcaaatt
tggaaaagttggccccgggcccaggaactgtgcccagaaaacttcattcattttaacaat
aaattagtcattaaaaagatggatgctagaaaatatgaagagagtctaaaggcagaatta
acaagttggattaaaaatggcaacgtagagcaggccagaatggtacttcagaatcttagt
cctgaagcagatttgagtccagaaaacatgatcaccatgtttccacttctagttgaaaaa
ctgaggaaaatggagaagttacctgcactattttttttattcaagttaggagctgtagaa
aacgcagctgaaagtgcgagcactttcctaaagaaaaagcaggagacaaaaaggcctccc
aaagctgataaagaagcccatgtcatggctaacaaacttcgaaaagttaaaaaatccata
gagaaacaaaagatcatagatgaaaagagccagaaaaaaaccagaaatgtggatcaaagc
ctaatacatgaagctgaacatgataatctagtgaagtgtctagagaagaacctggaaatc
ccacaggactgcacatatgctgatcaaaaagcagtggacactgagactttgcagaaggta
tttggtcgagtaaaatttgaaagaaaaggtgaagaattgaaagccttggcagaaaggggt
attggatatcatcacagtgctatgagtttcaaagaaaaacaattagttgaaatcctcttt
agaaaaggatatcttagggtggtgacagctactggaacacttgctttaggtgtcaacatg
ccttgtaaatctgtggtttttgctcaaaactcagtctatctggatgcgttgaattataga
cagatgtctggccgtgctggaagaagaggtcaagacctgatgggagatgtatatttcttt
gatattccattccccaaaataggaaaactcataaaatccaatgttcctgagctgagagga
cagttccctctcagcataaccctggtcctgcgactcatgctgctggcttccaagggagat
gacccagaggatgccaaggcaaaggtgctatcagtgctaaagcattcattgctgtccttc
aagcaacccagagtcatggacatgttaaaactttacttcctgttttctttgcagttcctg
gtgaaagagggctatttagatcaagaaggtaatcctatggggtttgctggacttgtatca
catttgcattatcatgaaccttctaatcttgtttttgtcagttttcttgtaaatggcctc
ttccatgatctctgtcagccaaccaggaaaggctcaaaacatttttctcaagacgttatg
gaaaagctagtattagtattggcacatctctttggaagaagatattttccaccaaagttc
caagatgcacacttcgagttttatcaatcaaaggtgttccttgatgatctccctgaggat
tttagtgatgctttagatgaatataacatgaaaattatggaggactttaccactttccta
cgaattgtttccaaactggctgatatgaatcaggaatatcaactcccattgtcaaaaatc
aaattcacaggtaaagaatgtgaagactctcaactcgtatctcatttgatgagctgcaag
gaaggaagagtagcaatttcaccatttgtttgtctgtctgggaactttgatgatgatttg
cttcgactggaaactccaaaccatgttactctaggcacaatcggtgtcaatcgctctcag
gctccagtgctgttgtcacagaaatttgataaccgaggaaggaaaatgtcgcttaatgcc
tatgcactggatttctacaaacatggttccttgataggattagtccaggataacaggatg
aatgaaggagatgcttattatttgttgaaagattttgcactcaccattaaatctatcagt
gtttccttgcgcgagctatgtgaaaatgaagacgacaacgttgtcttagcctttgaacaa
ctgagtacaactttttgggaaaagttaaacaaagtctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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