KEGG   Pseudomonas pseudoalcaligenes: BN5_1661
Entry
BN5_1661          CDS       T03772                                 
Symbol
recD1
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ppse  Pseudomonas pseudoalcaligenes
Pathway
ppse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BN5_1661 (recD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppse03400]
    BN5_1661 (recD1)
Enzymes [BR:ppse01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BN5_1661 (recD1)
DNA repair and recombination proteins [BR:ppse03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BN5_1661 (recD1)
SSDB
Motif
Pfam: AAA_19 AAA_30 AAA_11 UvrD_C_2 Helicase_RecD AAA_22 Viral_helicase1 SH3_13 RecD_N UvrD-helicase AAA_16 SLFN-g3_helicase nSTAND3 DEAD PhoH AAA_28 AAA_17 Mg_chelatase NTPase_1 ATPase AAA_25 AAA_5 AAA_7 AAA_29 T2SSE TrwB_AAD_bind NACHT GvpD_P-loop AAA_24
Other DBs
NCBI-ProteinID: CDM40252
UniProt: W6QUX8
Position
1753686..1755716
AA seq 676 aa
MSTMLAPVLRDRAELFALLSIWSERGWLRELDRALVQLFAELDPQASPLLLLGAALASHQ
LGQGHVCLDLAATLANPDFTLSLPPEGEDAQEAMILPSQVLAGLSLESWLAACAGSALLE
SEGAPLVLSGACLYMRRYWNYERQVAGDIARRLQSSDAAPSDLAVRLASLFPEPLVVDGQ
RLTDWQKLACAMAAQGRFTLITGGPGTGKTTTVVRLLALLQEAAMATGEPLRLSLAAPTG
KAAARLTESIGAQVQSLALDERVREQIPTLVTTLHRLLGSRPGSRHFRHDAANPLPLDVL
VVDEASMIDLEMMASLLSALPAHARLILLGDKDQLASVEAGAVLGDLCREAESGGYSEAT
RTWLESQTGERLEDPVLVPGDKALAQHIVMLRHSRRFGSGSGIGRLARAVNLGDAQSARA
TLATGAHDLYVLRLSGEQDRALERLLIEGQGGGEPRPQGYAHYLQVMQAERPAPDADSQA
WDLWAGRVLAAFDQFQLLCAVRKGTWGVEALNERIAEALVKRGLLEQSHGWYEGRPVLVT
RNDYSLGLMNGDIGIALRLPEPPEFPGAPVREVLRVVFPRNDGSGALRHILPSRLSAVET
VFAMTVHKSQGSEFAHCALILPDSLNPVLTKELVYTGITRARHWFSLVESRAGIFEQAVQ
RCVTRRSGLREALEKQ
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgagcacgatgcttgcaccggtgctgcgtgatcgcgccgaactctttgccctgctttct
atatggagcgagcgtggttggctgcgcgagctggatcgggcgttggtgcagttgttcgcc
gaactggatccgcaggcttcaccgctgctcctgctcggcgccgcgctggccagtcaccag
ctgggtcaggggcacgtctgcctggatctggcggccacgctggccaatccggacttcacc
ctgtccctaccgccggaaggcgaggatgcgcaagaggcgatgatcctgccgtcccaggta
ctggctgggcttagcctggagtcctggctggcagcctgtgcgggcagtgcgttgctggag
tccgagggggcgccgttggtgctcagcggcgcctgtctatatatgaggcgctactggaac
tatgaacgtcaggtggctggcgatatcgctcggcgcttgcagtcgagtgatgcggcgcct
agcgatctagccgtacgcctggcctcactgtttcccgaaccgctggtggtggacggccag
cgcctcaccgactggcagaagctggcctgtgccatggcggcgcaagggcgctttaccctg
attaccggtgggccgggaaccggcaagacgactacagtggtgcgtctgctagcgctgttg
caggaggcggccatggccactggcgagccgctgcgcctgagtctggcggcgcccaccggc
aaagcggccgcgcggctgaccgaatccatcggcgcgcaggtgcagtcgctggcgctggac
gagcgagtgcgggagcagattccaaccctggtgacgacgctgcatcgcctgctgggcagt
cgtcctggcagccgtcatttccgtcacgatgccgccaaccccttgccgctggacgtgctg
gtggtcgacgaggcgtcgatgatcgacctcgagatgatggccagcctgctgagtgccctg
ccggcgcatgcgcgcctgattctgctgggcgacaaggaccagctcgcgtcggtggaggcc
ggcgcggtgctgggggacctgtgccgagaggcggaaagcggtggctacagcgaggcgacg
cgtacctggctggaaagccagacgggcgaacggctggaagatccggtgttggtgcccggt
gacaaggctctggcgcagcatatcgtcatgctgcgtcactcgcgtcgtttcggcagtggt
tcgggtatcgggcgtctggcgcgtgcggtgaacctgggtgatgcgcagtcggcccgcgcg
actctggcaaccggtgcacatgatttgtacgtgttgcgtttgtcaggtgagcaggatcgt
gcgctggagcgactattaatagaggggcagggcggcggcgagcctcgtccgcaagggtat
gcacattatctgcaggtgatgcaggcggagcgtccggctccagatgccgactcccaggcc
tgggatctttgggccggtcgcgtcctggcagcgttcgatcagttccagttgctctgtgcg
gttcgcaaaggtacatggggcgtggaagcgctcaacgaacgtattgccgaagcactggta
aagcggggcctgcttgagcagtcgcatggctggtatgaaggtcgacctgtgctggtaacg
cgcaacgactacagcctgggtctgatgaacggcgatattggcatcgcgctgcgtctgccg
gagccgcctgagtttccaggtgcgcctgtacgcgaggtgctgcgcgttgtgttcccgcgc
aacgacggcagcggcgccttgcgacatatcctgcccagccgtctgagtgcggtggagacc
gtgttcgccatgaccgtgcacaagtcgcagggctcggagttcgctcattgtgcgctgatc
ctgcctgacagcctcaatccggtgttgaccaaggagctggtctacaccggcatcacacgg
gctcgtcactggttcagcctggtcgaaagccgagcgggcatcttcgagcaggctgtgcag
cggtgcgtgacgagacgcagtggcctgcgcgaggcgctggaaaagcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (39)   

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