KEGG   Pseudomonas pseudoalcaligenes: BN5_3558
Entry
BN5_3558          CDS       T03772                                 
Symbol
hsdS
Name
(GenBank) putative type I restriction enzyme specificity subunit S
  KO
K01154  type I restriction enzyme, S subunit [EC:3.1.21.3]
Organism
ppse  Pseudomonas pseudoalcaligenes
Brite
KEGG Orthology (KO) [BR:ppse00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppse02048]
    BN5_3558 (hsdS)
Enzymes [BR:ppse01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BN5_3558 (hsdS)
Prokaryotic defense system [BR:ppse02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BN5_3558 (hsdS)
SSDB
Motif
Pfam: Methylase_S
Other DBs
NCBI-ProteinID: CDM42110
UniProt: W6QZ19
Position
complement(3692280..3693908)
AA seq 542 aa
MSKLPQGWVSVNIADVAEVNPRKSVDLSPDEFVTFVPMAAVSEITGAIATPMRRPLRQVN
KGFTQFAENDVIFAKITPSMENGKAAVAANLTNGIGFGSTEFHVFRSKGAVLPKFLWYFI
RQQSFRDNARKVMSGAVGQQRVPADYLRSHPLLLPPIQEQERIVAKIDNLISRSARARSE
LKKIPSLLAAYKSAVLELAFSGKLTANLRGSNSDTTSGLPEGWTIQRLGDISEIQSGIQV
GKRRSGQEELVEVSYLRVANVQRGWLNLDEIKTIFVTPEEKARLLLAQGDVLMNEGGDRD
KLGRGWVWNGEVDECIHQNHVFRIRMKPATLPPEFVSHFSNERGQQYFFDEGTQTTNLAS
ISKRKVAALPLPVPPFEEAVEIVRRIERTFMWLDRVAASHGGASQLLEKLDTALLSKAFE
GQLIPQNAGDEPASALLERVKAEFVAQPRKIQSRKQIYQGQTREKLMAIERTLEQVLTEA
KNWLPAQDVFQRCGIGDGASTEEIERLYSELRDLDLAGKLETEAVNDDQGRKIYDRIRLK
AV
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgagtaagcttcctcagggatgggtgagcgttaatattgcagatgtggcggaagttaac
ccacgcaaatcagtcgatctttcgccagatgagttcgtaacatttgttcctatggcggct
gttagcgaaataactggggcgatcgccactccgatgaggcgcccccttagacaagttaat
aaggggttcactcagtttgccgaaaatgatgtgatcttcgcgaagattacgccttccatg
gagaatggaaaggctgccgttgctgccaatcttactaatgggataggtttcggctctacg
gaatttcacgtctttcgaagcaaaggggcggttcttccgaaatttctttggtatttcatc
cgccaacagagctttcgggataacgcgcgaaaagtaatgtctggcgcagttggtcagcaa
agagttccggcagattatttaaggagccaccccttattgctgccccctatccaagaacaa
gagcgtatcgtcgccaagatagataatttgatttcccgtagtgcgcgtgctcgtagcgaa
ttaaagaagattccttctctactagcggcatataagtccgcagtgcttgaattagctttc
tcgggaaaattgacagccaatcttcgcggcagtaattctgatactacttctggtcttccc
gaagggtggacgatacaaagattgggcgatatcagtgaaattcaaagcggaatccaagtt
gggaaacgtagaagcggacaggaagaactagttgaggtgtcgtatcttcgtgtggccaat
gttcaaaggggatggttgaatcttgacgagatcaagacgattttcgtcaccccggaagag
aaagcccgtcttttattagcacagggtgacgtgctcatgaacgaagggggtgatcgtgat
aagttggggcgggggtgggtctggaatggtgaagttgacgaatgtattcaccaaaatcac
gttttccgtatccgtatgaaaccggcgaccttgccgccagaatttgtctctcatttttct
aacgagcgtggtcaacaatatttttttgatgaaggtactcagacgacaaatttagcttcg
atcagtaaaagaaaggtagcggctctgccactgccggttcctccttttgaggaagcggta
gagattgttcgtcggatagaacgcacttttatgtggttagatcgggtcgctgccagtcac
ggtggtgcttctcagttgctggaaaagctcgacactgcactcctctccaaagcttttgaa
ggacaactgattcctcaaaacgcaggtgacgaaccagcgtcggctttgctagagcgtgtc
aaagcagaatttgtggcacaacccagaaaaattcaaagtcgaaagcagatctaccagggg
cagacacgggagaaactcatggcgatagaaagaacacttgagcaggttttaacagaggcg
aagaattggcttcctgcgcaagacgtatttcagcgctgtggaatcggcgacggagcgtct
accgaagagattgagcgattgtattcggaattgcgagatttggatttggccggaaagctg
gagacggaggccgtcaatgacgatcagggacgtaaaatttacgaccgcatccgtttgaag
gcggtgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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