KEGG   Pseudomonas pseudoalcaligenes: BN5_4353
Entry
BN5_4353          CDS       T03772                                 
Symbol
dnaQ7
Name
(GenBank) putative DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ppse  Pseudomonas pseudoalcaligenes
Pathway
ppse03030  DNA replication
ppse03430  Mismatch repair
ppse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BN5_4353 (dnaQ7)
   03430 Mismatch repair
    BN5_4353 (dnaQ7)
   03440 Homologous recombination
    BN5_4353 (dnaQ7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppse03032]
    BN5_4353 (dnaQ7)
   03400 DNA repair and recombination proteins [BR:ppse03400]
    BN5_4353 (dnaQ7)
Enzymes [BR:ppse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BN5_4353 (dnaQ7)
DNA replication proteins [BR:ppse03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BN5_4353 (dnaQ7)
DNA repair and recombination proteins [BR:ppse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BN5_4353 (dnaQ7)
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: CDM42887
UniProt: W6R2F0
Position
4515694..4516401
AA seq 235 aa
MSERAAQDWPQLFASLADSSRDPRLRAFYGAGCVAADTPLEDVPLVALDVETTGLDPRKH
AIVSLGLVPLSLQRIRCAEARYWVVKPTSELSAESVTFHHITHSDIRHAPRLASVLEELL
EALAGKVVVVHYRNIERSFLDQAVRQHLGEGLIFPTIDTMELEARLHPKRTVSWWDRLRG
REPISIRLADSRLRYGLPLYSAHHALTDALACGELLQAQVATHYPGRTLISALWS
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcgagcgcgcggcccaggactggccgcaactgttcgccagcctcgccgacagcagc
cgcgacccgcgcctacgcgccttctacggcgccggctgcgtcgcggctgatacgccactg
gaggatgtcccgctggtggcgctggacgtggaaaccaccggcctcgacccgcgtaagcac
gccatcgtcagccttggcctggtgccactgagcctgcaacgcatccgctgcgcagaagcc
cgttattgggtggtcaaacccaccagcgagttgagtgccgaatcagtcaccttccaccac
atcacccacagcgacatccgccacgccccacgcctggccagcgtgctcgaagagctgctg
gaagctctggccggcaaggtggtggtcgtgcactaccgcaatatcgaacgcagcttcctc
gaccaggctgtgcgccagcacctgggcgaagggctgatcttccccaccatcgacaccatg
gaactggaagcccgcctgcaccccaagcgcaccgtaagctggtgggaccgcctgcgcggt
cgcgagcccatttccatccgcctggccgacagccgcctgcgctatggcctgccgctgtac
tccgcacaccatgcactgaccgatgcactggcctgtggcgagctgctacaggcgcaggtg
gcgacgcactatccggggcgtacactgatcagcgctctctggagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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