KEGG   Pseudomonas psychrotolerans: BJP27_00605
Entry
BJP27_00605       CDS       T05074                                 
Name
(GenBank) signal peptide prediction
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
ppsl  Pseudomonas psychrotolerans
Pathway
ppsl02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppsl00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BJP27_00605
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ppsl02000]
    BJP27_00605
Transporters [BR:ppsl02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    BJP27_00605
SSDB
Motif
Pfam: SBP_bac_8 BTK
Other DBs
NCBI-ProteinID: APQ10085
Position
123228..124412
AA seq 394 aa
MSTPLTLRVLGTSVTLLEPIRQRAEAELGIRLVYQIHDVQTAQRIAVLEPGSYDLYDQWF
HNVDFVWPARAIQPIDIRRIALWEEINDLPKRGRLHATDRLAPGCRPCDRLYVQHDGSLG
GQPSERISMLPLTHNADSFAYRPGSLPAALAGQQESWAWLIDEGWCGHSALQSDAAIGAL
DAALAIQAAGLARFDDIGNLRLEEIDRLAELLVARQRHRHFAAFWSDDRSAGELTLAAGV
DIQSLWSPMLMALHRAGVDYRVAVPREGYRAWFGGLSLSRCAEGRVRDAAYAYLNWWLAG
WPGAVMARQGFYIANPVRARDHLSAAEWDFWYGGLPAREELAGSDGLPLIEVGQRREGGS
YAERMSHIGVWNSVMDEHNYLVRRWSEFLRTTAA
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgagcacgccgctgaccctgagggtgctgggcacctcggtgaccctgctcgaacccatc
cgccaacgggcggaggcggagctgggcatccgcctggtctaccagatccatgatgtccag
accgcccagcgcatcgcggtgctggaacccggtagctacgatctctatgaccagtggttc
cataacgtcgacttcgtctggccggcgcgggcgatccagcccatcgacatccgccgcatc
gcgctctgggaggaaatcaacgacctgcccaagcgcggccggctgcatgccacggatcgc
ctggcgcccggctgccgaccgtgcgaccgcctctatgtgcagcacgacggcagcctgggc
ggccagcccagcgagcgcatcagcatgctgccgctgacccacaacgccgatagcttcgcc
tatcgtccgggaagcctgcctgcggccctggcgggtcagcaggagagctgggcctggctg
atcgacgaaggctggtgcggccacagcgccctgcagagcgacgccgccatcggcgccctg
gatgccgccctggcgatccaggcggcaggtctagcccgtttcgacgacatcggcaacctg
cgtctggaggaaatcgaccgcctggccgagctgctggtggcgcgccagcggcaccggcat
ttcgccgccttctggtccgatgaccgcagcgccggcgagctgaccctggccgccggggtg
gatatccagagtctctggtcacccatgctcatggccctgcaccgcgcaggcgtggattac
cgggtggcggtcccgcgcgagggctatcgcgcctggttcggcggcctgtcgctgtcgcgc
tgcgcggagggtcgggtgcgcgacgccgcctatgcttacctcaactggtggctggccggc
tggcccggcgcggtgatggcgcgtcagggcttctatatcgccaatccggtccgggcgcgg
gatcacctcagcgctgccgagtgggacttctggtatggcggcttgccggcccgggaagag
ctcgccggcagcgacggcttgccgctgatcgaggtaggccagcgtcgtgagggcggttcc
tacgccgagcgcatgagccatatcggcgtgtggaattcggtgatggacgaacacaactac
ctggtgcggcgctggagcgaattcctgcggaccaccgcggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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